Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM58Q8NG06 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.92■□□□□ 0.94
TRIM58Q8NG06 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM58Q8NG06 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 AC005837.3-201ENST00000612163 286 ntBASIC20.91■□□□□ 0.94
TRIM58Q8NG06 PHGDH-210ENST00000641115 1638 ntBASIC20.91■□□□□ 0.94
TRIM58Q8NG06 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM58Q8NG06 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 AC010536.3-201ENST00000620306 533 ntBASIC20.9■□□□□ 0.94
TRIM58Q8NG06 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM58Q8NG06 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
TRIM58Q8NG06 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM58Q8NG06 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.89■□□□□ 0.94
TRIM58Q8NG06 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM58Q8NG06 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM58Q8NG06 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 HLA-G-202ENST00000376815 851 ntBASIC20.89■□□□□ 0.93
TRIM58Q8NG06 HLA-G-203ENST00000376818 1127 ntBASIC20.89■□□□□ 0.93
TRIM58Q8NG06 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM58Q8NG06 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM58Q8NG06 MCRIP2P1-201ENST00000394346 511 ntBASIC20.88■□□□□ 0.93
TRIM58Q8NG06 AC007322.4-201ENST00000509611 723 ntBASIC20.88■□□□□ 0.93
TRIM58Q8NG06 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms