Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.43■■□□□ 1.5
SMC5Q8IY18 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.42■■□□□ 1.5
SMC5Q8IY18 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SMC5Q8IY18 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMC5Q8IY18 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AC124283.5-201ENST00000624661 1809 ntBASIC24.41■■□□□ 1.5
SMC5Q8IY18 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMC5Q8IY18 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMC5Q8IY18 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AL390719.1-204ENST00000412397 1219 ntBASIC24.41■■□□□ 1.5
SMC5Q8IY18 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 AC098934.4-201ENST00000564127 592 ntBASIC24.41■■□□□ 1.5
SMC5Q8IY18 MIR4758-201ENST00000577688 71 ntBASIC24.41■■□□□ 1.5
SMC5Q8IY18 AC006557.6-201ENST00000623071 864 ntBASIC24.41■■□□□ 1.5
SMC5Q8IY18 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.41■■□□□ 1.5
SMC5Q8IY18 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SMC5Q8IY18 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 AP000974.1-201ENST00000623909 2387 ntBASIC24.4■■□□□ 1.5
SMC5Q8IY18 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 SLC29A4P1-201ENST00000398760 971 ntBASIC24.4■■□□□ 1.5
SMC5Q8IY18 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.4■■□□□ 1.5
SMC5Q8IY18 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SMC5Q8IY18 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SMC5Q8IY18 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMC5Q8IY18 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMC5Q8IY18 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMC5Q8IY18 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SMC5Q8IY18 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SMC5Q8IY18 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SMC5Q8IY18 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMC5Q8IY18 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMC5Q8IY18 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 AC083880.1-201ENST00000608266 535 ntBASIC24.39■■□□□ 1.49
SMC5Q8IY18 HLA-B-256ENST00000639848 1089 ntBASIC24.39■■□□□ 1.49
SMC5Q8IY18 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
SMC5Q8IY18 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
SMC5Q8IY18 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms