Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF135Q8IUD6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF135Q8IUD6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF135Q8IUD6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
RNF135Q8IUD6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF135Q8IUD6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF135Q8IUD6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 PLK5-205ENST00000642079 1969 ntBASIC20.89■□□□□ 0.93
RNF135Q8IUD6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AC004264.1-201ENST00000608354 794 ntBASIC20.89■□□□□ 0.93
RNF135Q8IUD6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AC121338.2-201ENST00000622535 1744 ntBASIC20.89■□□□□ 0.93
RNF135Q8IUD6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF135Q8IUD6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.88■□□□□ 0.93
RNF135Q8IUD6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF135Q8IUD6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 CR392000.1-201ENST00000624770 1228 ntBASIC20.87■□□□□ 0.93
RNF135Q8IUD6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF135Q8IUD6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 AC124283.5-201ENST00000624661 1809 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms