Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PACS2Q86VP3 LINC01465-201ENST00000408887 1940 ntBASIC19.76■□□□□ 0.75
PACS2Q86VP3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 OR7E47P-201ENST00000546390 1422 ntBASIC19.76■□□□□ 0.75
PACS2Q86VP3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PACS2Q86VP3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PACS2Q86VP3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PACS2Q86VP3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 AC034268.1-201ENST00000441047 882 ntBASIC19.74■□□□□ 0.75
PACS2Q86VP3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PACS2Q86VP3 AC020763.4-201ENST00000623414 4170 ntBASIC19.74■□□□□ 0.75
PACS2Q86VP3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PACS2Q86VP3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.73■□□□□ 0.75
PACS2Q86VP3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PACS2Q86VP3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.72■□□□□ 0.75
PACS2Q86VP3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.72■□□□□ 0.75
PACS2Q86VP3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PACS2Q86VP3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS2Q86VP3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS2Q86VP3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PACS2Q86VP3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PACS2Q86VP3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.71■□□□□ 0.75
PACS2Q86VP3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.71■□□□□ 0.75
PACS2Q86VP3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms