Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 AC136469.2-201ENST00000623944 1028 ntBASIC16.37■□□□□ 0.21
ZNF546Q86UE3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.37■□□□□ 0.21
ZNF546Q86UE3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 SYT6-210ENST00000641643 1587 ntBASIC16.36■□□□□ 0.21
ZNF546Q86UE3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.36■□□□□ 0.21
ZNF546Q86UE3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.36■□□□□ 0.21
ZNF546Q86UE3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 AC090164.3-201ENST00000610780 2143 ntBASIC16.36■□□□□ 0.21
ZNF546Q86UE3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF546Q86UE3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 SLC47A1P1-202ENST00000449666 945 ntBASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 AC011298.3-201ENST00000615796 283 ntBASIC16.35■□□□□ 0.21
ZNF546Q86UE3 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.35■□□□□ 0.21
ZNF546Q86UE3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 AP004607.4-201ENST00000530158 1459 ntBASIC16.35■□□□□ 0.21
ZNF546Q86UE3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF546Q86UE3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 SERBP1P1-201ENST00000396021 1160 ntBASIC16.34■□□□□ 0.21
ZNF546Q86UE3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.34■□□□□ 0.21
ZNF546Q86UE3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms