Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 FAM197Y4-202ENST00000622692 608 ntBASIC18.91■□□□□ 0.62
RNF44Q7L0R7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.91■□□□□ 0.62
RNF44Q7L0R7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF44Q7L0R7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 AC110285.5-201ENST00000611501 352 ntBASIC18.9■□□□□ 0.62
RNF44Q7L0R7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF44Q7L0R7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF44Q7L0R7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 NBPF21P-201ENST00000425093 1451 ntBASIC18.89■□□□□ 0.61
RNF44Q7L0R7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.61
RNF44Q7L0R7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF44Q7L0R7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 AL691432.2-201ENST00000607222 2038 ntBASIC18.88■□□□□ 0.61
RNF44Q7L0R7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 UBE2SP1-201ENST00000450587 669 ntBASIC18.88■□□□□ 0.61
RNF44Q7L0R7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 AL391422.3-201ENST00000603791 2761 ntBASIC18.88■□□□□ 0.61
RNF44Q7L0R7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF44Q7L0R7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms