Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
USP50Q70EL3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 AC246785.2-201ENST00000432512 513 ntBASIC23.4■■□□□ 1.34
USP50Q70EL3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.4■■□□□ 1.34
USP50Q70EL3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.4■■□□□ 1.34
USP50Q70EL3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.4■■□□□ 1.34
USP50Q70EL3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.4■■□□□ 1.34
USP50Q70EL3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.4■■□□□ 1.34
USP50Q70EL3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
USP50Q70EL3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
USP50Q70EL3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
USP50Q70EL3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
USP50Q70EL3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP50Q70EL3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP50Q70EL3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP50Q70EL3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP50Q70EL3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
USP50Q70EL3 AC112907.2-201ENST00000448639 330 ntBASIC23.39■■□□□ 1.33
USP50Q70EL3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.39■■□□□ 1.33
USP50Q70EL3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.39■■□□□ 1.33
USP50Q70EL3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.39■■□□□ 1.33
USP50Q70EL3 AC083849.1-201ENST00000615227 514 ntBASIC23.39■■□□□ 1.33
USP50Q70EL3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
USP50Q70EL3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
USP50Q70EL3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
USP50Q70EL3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
USP50Q70EL3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.38■■□□□ 1.33
USP50Q70EL3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.38■■□□□ 1.33
USP50Q70EL3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.38■■□□□ 1.33
USP50Q70EL3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
USP50Q70EL3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
USP50Q70EL3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
USP50Q70EL3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
USP50Q70EL3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 AP000523.1-201ENST00000398242 1049 ntBASIC23.37■■□□□ 1.33
USP50Q70EL3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
USP50Q70EL3 FDX1P1-201ENST00000449115 551 ntBASIC23.37■■□□□ 1.33
USP50Q70EL3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.37■■□□□ 1.33
USP50Q70EL3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.37■■□□□ 1.33
USP50Q70EL3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
USP50Q70EL3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.37■■□□□ 1.33
USP50Q70EL3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
USP50Q70EL3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.36■■□□□ 1.33
USP50Q70EL3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
USP50Q70EL3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.36■■□□□ 1.33
USP50Q70EL3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.36■■□□□ 1.33
USP50Q70EL3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP50Q70EL3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP50Q70EL3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
USP50Q70EL3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
USP50Q70EL3 TSPY21P-201ENST00000433481 731 ntBASIC23.36■■□□□ 1.33
USP50Q70EL3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.36■■□□□ 1.33
USP50Q70EL3 TSPY23P-201ENST00000440136 739 ntBASIC23.36■■□□□ 1.33
USP50Q70EL3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.36■■□□□ 1.33
USP50Q70EL3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.36■■□□□ 1.33
USP50Q70EL3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.36■■□□□ 1.33
USP50Q70EL3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.36■■□□□ 1.33
USP50Q70EL3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
USP50Q70EL3 AL121603.2-201ENST00000557373 2117 ntBASIC23.35■■□□□ 1.33
USP50Q70EL3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.35■■□□□ 1.33
USP50Q70EL3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
USP50Q70EL3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.35■■□□□ 1.33
USP50Q70EL3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.35■■□□□ 1.33
USP50Q70EL3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
USP50Q70EL3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.35■■□□□ 1.33
USP50Q70EL3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.35■■□□□ 1.33
USP50Q70EL3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.35■■□□□ 1.33
USP50Q70EL3 AP003041.3-201ENST00000527151 707 ntBASIC23.35■■□□□ 1.33
USP50Q70EL3 HYMAI.1-201ENST00000620949 238 ntBASIC23.35■■□□□ 1.33
USP50Q70EL3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
USP50Q70EL3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.35■■□□□ 1.33
USP50Q70EL3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
USP50Q70EL3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.35■■□□□ 1.33
USP50Q70EL3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
USP50Q70EL3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
USP50Q70EL3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
USP50Q70EL3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms