Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00575Q6W349 AC009113.1-201ENST00000570267 2443 ntBASIC12.5□□□□□ -0.41
LINC00575Q6W349 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00575Q6W349 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 LTB4R2-202ENST00000528054 3092 ntBASIC12.49□□□□□ -0.41
LINC00575Q6W349 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 AC104581.1-202ENST00000635932 2618 ntBASIC12.49□□□□□ -0.41
LINC00575Q6W349 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00575Q6W349 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00575Q6W349 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 KRT16P2-201ENST00000414673 1423 ntBASIC12.48□□□□□ -0.41
LINC00575Q6W349 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 BX842568.3-201ENST00000418104 571 ntBASIC12.48□□□□□ -0.41
LINC00575Q6W349 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00575Q6W349 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00575Q6W349 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 AC018470.1-201ENST00000624790 3129 ntBASIC12.47□□□□□ -0.41
LINC00575Q6W349 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 AL512631.2-201ENST00000604634 923 ntBASIC12.47□□□□□ -0.41
LINC00575Q6W349 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.47□□□□□ -0.41
LINC00575Q6W349 AC105233.4-201ENST00000642045 216 ntBASIC12.47□□□□□ -0.41
LINC00575Q6W349 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.47□□□□□ -0.41
LINC00575Q6W349 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC00575Q6W349 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms