Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LDLRAP1Q5SW96 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 AP001271.2-201ENST00000624018 1556 ntBASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 AC018553.1-201ENST00000616682 1458 ntBASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LDLRAP1Q5SW96 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 AL691432.2-201ENST00000607222 2038 ntBASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 MTDHP1-201ENST00000605323 784 ntBASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 TCF3P1-201ENST00000423021 1937 ntBASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.59■□□□□ 0.73
LDLRAP1Q5SW96 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LDLRAP1Q5SW96 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.58■□□□□ 0.73
LDLRAP1Q5SW96 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.58■□□□□ 0.73
LDLRAP1Q5SW96 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDLRAP1Q5SW96 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LDLRAP1Q5SW96 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 AC233263.1-201ENST00000578059 224 ntBASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LDLRAP1Q5SW96 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 RN7SL471P-201ENST00000580476 299 ntBASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.57■□□□□ 0.72
LDLRAP1Q5SW96 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms