Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 DPP3P2-201ENST00000416030 1696 ntBASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
KHDC1Q4VXA5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 AC060766.5-201ENST00000590539 871 ntBASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
KHDC1Q4VXA5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.92■□□□□ 0.78
KHDC1Q4VXA5 AC092368.3-202ENST00000574180 1591 ntBASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 PNMA6B-201ENST00000538162 1200 ntBASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
KHDC1Q4VXA5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 LETM1P2-201ENST00000597330 2178 ntBASIC19.9■□□□□ 0.78
KHDC1Q4VXA5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.89■□□□□ 0.77
KHDC1Q4VXA5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms