Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 RNF152P1-201ENST00000397754 604 ntBASIC19.28■□□□□ 0.68
CACNA1EQ15878 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA1EQ15878 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA1EQ15878 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CACNA1EQ15878 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNA1EQ15878 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.27■□□□□ 0.68
CACNA1EQ15878 AC004980.1-204ENST00000429707 299 ntBASIC19.27■□□□□ 0.68
CACNA1EQ15878 BX664615.1-201ENST00000443558 458 ntBASIC19.27■□□□□ 0.68
CACNA1EQ15878 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.27■□□□□ 0.68
CACNA1EQ15878 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA1EQ15878 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.27■□□□□ 0.68
CACNA1EQ15878 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CACNA1EQ15878 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 KRT18P48-201ENST00000434763 852 ntBASIC19.26■□□□□ 0.67
CACNA1EQ15878 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 TUBB8P6-201ENST00000436895 1288 ntBASIC19.26■□□□□ 0.67
CACNA1EQ15878 AC009947.2-201ENST00000444014 672 ntBASIC19.26■□□□□ 0.67
CACNA1EQ15878 AC131212.4-201ENST00000623606 975 ntBASIC19.26■□□□□ 0.67
CACNA1EQ15878 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.26■□□□□ 0.67
CACNA1EQ15878 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CACNA1EQ15878 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 SLC25A1P4-201ENST00000567977 778 ntBASIC19.25■□□□□ 0.67
CACNA1EQ15878 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 MFAP1P1-201ENST00000442257 1255 ntBASIC19.25■□□□□ 0.67
CACNA1EQ15878 FAM207BP-201ENST00000447172 505 ntBASIC19.25■□□□□ 0.67
CACNA1EQ15878 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CACNA1EQ15878 AC010653.2-201ENST00000623505 997 ntBASIC19.25■□□□□ 0.67
CACNA1EQ15878 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CACNA1EQ15878 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.24■□□□□ 0.67
CACNA1EQ15878 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.24■□□□□ 0.67
CACNA1EQ15878 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CACNA1EQ15878 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CACNA1EQ15878 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CACNA1EQ15878 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1EQ15878 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1EQ15878 AC133561.1-201ENST00000568600 2415 ntBASIC19.23■□□□□ 0.67
CACNA1EQ15878 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1EQ15878 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 AL023803.3-201ENST00000615559 522 ntBASIC19.23■□□□□ 0.67
CACNA1EQ15878 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1EQ15878 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 DPP3P2-201ENST00000416030 1696 ntBASIC19.23■□□□□ 0.67
CACNA1EQ15878 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CACNA1EQ15878 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CACNA1EQ15878 HLA-A-209ENST00000638375 975 ntBASIC19.23■□□□□ 0.67
CACNA1EQ15878 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CACNA1EQ15878 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms