Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.32■□□□□ 0.36
UBE2NP61088 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.32■□□□□ 0.36
UBE2NP61088 MTDHP1-201ENST00000605323 784 ntBASIC17.32■□□□□ 0.36
UBE2NP61088 AL023875.1-201ENST00000640777 796 ntBASIC17.32■□□□□ 0.36
UBE2NP61088 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 AL162377.1-201ENST00000618844 1793 ntBASIC17.32■□□□□ 0.36
UBE2NP61088 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBE2NP61088 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.32■□□□□ 0.36
UBE2NP61088 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
UBE2NP61088 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBE2NP61088 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.32■□□□□ 0.36
UBE2NP61088 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2NP61088 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.31■□□□□ 0.36
UBE2NP61088 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBE2NP61088 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
UBE2NP61088 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2NP61088 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.31■□□□□ 0.36
UBE2NP61088 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBE2NP61088 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.31■□□□□ 0.36
UBE2NP61088 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBE2NP61088 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBE2NP61088 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
UBE2NP61088 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2NP61088 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
UBE2NP61088 KRASP1-201ENST00000407852 552 ntBASIC17.3■□□□□ 0.36
UBE2NP61088 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2NP61088 RPPH1-201ENST00000516869 333 ntBASIC17.3■□□□□ 0.36
UBE2NP61088 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2NP61088 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2NP61088 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.3■□□□□ 0.36
UBE2NP61088 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2NP61088 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 AC116351.2-201ENST00000606540 1585 ntBASIC17.3■□□□□ 0.36
UBE2NP61088 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2NP61088 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.3■□□□□ 0.36
UBE2NP61088 AC018553.1-201ENST00000616682 1458 ntBASIC17.3■□□□□ 0.36
UBE2NP61088 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBE2NP61088 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBE2NP61088 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
UBE2NP61088 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.29■□□□□ 0.36
UBE2NP61088 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.29■□□□□ 0.36
UBE2NP61088 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
UBE2NP61088 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBE2NP61088 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2NP61088 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2NP61088 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2NP61088 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
UBE2NP61088 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.29■□□□□ 0.36
UBE2NP61088 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.29■□□□□ 0.36
UBE2NP61088 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2NP61088 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.29■□□□□ 0.36
UBE2NP61088 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.29■□□□□ 0.36
UBE2NP61088 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms