Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 BX088651.1-201ENST00000540551 451 ntBASIC19.45■□□□□ 0.7
SRP54P61011 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.45■□□□□ 0.7
SRP54P61011 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.45■□□□□ 0.7
SRP54P61011 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.45■□□□□ 0.7
SRP54P61011 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.45■□□□□ 0.7
SRP54P61011 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 AC018553.1-201ENST00000616682 1458 ntBASIC19.45■□□□□ 0.7
SRP54P61011 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRP54P61011 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.45■□□□□ 0.7
SRP54P61011 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.45■□□□□ 0.7
SRP54P61011 TFP1-202ENST00000475455 1573 ntBASIC19.44■□□□□ 0.7
SRP54P61011 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
SRP54P61011 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.44■□□□□ 0.7
SRP54P61011 AL355355.2-201ENST00000442321 338 ntBASIC19.44■□□□□ 0.7
SRP54P61011 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.44■□□□□ 0.7
SRP54P61011 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.44■□□□□ 0.7
SRP54P61011 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.44■□□□□ 0.7
SRP54P61011 AL353708.3-201ENST00000610272 989 ntBASIC19.44■□□□□ 0.7
SRP54P61011 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.44■□□□□ 0.7
SRP54P61011 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.44■□□□□ 0.7
SRP54P61011 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRP54P61011 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.44■□□□□ 0.7
SRP54P61011 PHGDH-210ENST00000641115 1638 ntBASIC19.43■□□□□ 0.7
SRP54P61011 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.43■□□□□ 0.7
SRP54P61011 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SRP54P61011 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP54P61011 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP54P61011 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SRP54P61011 TSPY15P-201ENST00000457163 923 ntBASIC19.43■□□□□ 0.7
SRP54P61011 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.43■□□□□ 0.7
SRP54P61011 AL355075.4-201ENST00000554988 638 ntBASIC19.43■□□□□ 0.7
SRP54P61011 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.43■□□□□ 0.7
SRP54P61011 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SRP54P61011 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.43■□□□□ 0.7
SRP54P61011 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SRP54P61011 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.43■□□□□ 0.7
SRP54P61011 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SRP54P61011 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRP54P61011 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.43■□□□□ 0.7
SRP54P61011 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.43■□□□□ 0.7
SRP54P61011 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.42■□□□□ 0.7
SRP54P61011 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SRP54P61011 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SRP54P61011 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.42■□□□□ 0.7
SRP54P61011 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.42■□□□□ 0.7
SRP54P61011 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.42■□□□□ 0.7
SRP54P61011 AP003071.4-201ENST00000562276 1284 ntBASIC19.42■□□□□ 0.7
SRP54P61011 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.42■□□□□ 0.7
SRP54P61011 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.42■□□□□ 0.7
SRP54P61011 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.42■□□□□ 0.7
SRP54P61011 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRP54P61011 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SRP54P61011 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRP54P61011 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 AC211429.1-201ENST00000415277 523 ntBASIC19.41■□□□□ 0.7
SRP54P61011 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.41■□□□□ 0.7
SRP54P61011 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SRP54P61011 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SRP54P61011 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SRP54P61011 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRP54P61011 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRP54P61011 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SRP54P61011 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms