Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CLTCL1P53675 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
CLTCL1P53675 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CLTCL1P53675 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CLTCL1P53675 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CLTCL1P53675 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC28.37■■■□□ 2.13
CLTCL1P53675 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.37■■■□□ 2.13
CLTCL1P53675 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 AC011298.2-201ENST00000617989 482 ntBASIC28.37■■■□□ 2.13
CLTCL1P53675 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
CLTCL1P53675 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC28.37■■■□□ 2.13
CLTCL1P53675 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC28.37■■■□□ 2.13
CLTCL1P53675 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC28.37■■■□□ 2.13
CLTCL1P53675 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CLTCL1P53675 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CLTCL1P53675 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CLTCL1P53675 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC28.36■■■□□ 2.13
CLTCL1P53675 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC28.36■■■□□ 2.13
CLTCL1P53675 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC28.36■■■□□ 2.13
CLTCL1P53675 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
CLTCL1P53675 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CLTCL1P53675 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CLTCL1P53675 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
CLTCL1P53675 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC28.36■■■□□ 2.13
CLTCL1P53675 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC28.36■■■□□ 2.13
CLTCL1P53675 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC28.36■■■□□ 2.13
CLTCL1P53675 AC008040.2-201ENST00000461049 708 ntBASIC28.36■■■□□ 2.13
CLTCL1P53675 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CLTCL1P53675 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC28.35■■■□□ 2.13
CLTCL1P53675 CRYGFP-201ENST00000418459 633 ntBASIC28.35■■■□□ 2.13
CLTCL1P53675 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC28.35■■■□□ 2.13
CLTCL1P53675 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 LTBR-211ENST00000543190 785 ntTSL 3 BASIC28.35■■■□□ 2.13
CLTCL1P53675 WWOX-216ENST00000569818 525 ntBASIC28.35■■■□□ 2.13
CLTCL1P53675 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CLTCL1P53675 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 KRT8P8-201ENST00000434750 1448 ntBASIC28.35■■■□□ 2.13
CLTCL1P53675 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CLTCL1P53675 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC28.35■■■□□ 2.13
CLTCL1P53675 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CLTCL1P53675 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 MFAP1P1-201ENST00000442257 1255 ntBASIC28.34■■■□□ 2.13
CLTCL1P53675 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.34■■■□□ 2.13
CLTCL1P53675 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CLTCL1P53675 FEM1AP1-201ENST00000431297 1995 ntBASIC28.33■■■□□ 2.13
CLTCL1P53675 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CLTCL1P53675 AP001271.2-201ENST00000624018 1556 ntBASIC28.33■■■□□ 2.13
CLTCL1P53675 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC28.33■■■□□ 2.13
CLTCL1P53675 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CLTCL1P53675 AL137013.1-201ENST00000432946 1228 ntBASIC28.33■■■□□ 2.13
CLTCL1P53675 GRAMD4P8-201ENST00000605465 1115 ntBASIC28.33■■■□□ 2.13
CLTCL1P53675 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CLTCL1P53675 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
CLTCL1P53675 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
CLTCL1P53675 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CLTCL1P53675 AC004951.3-201ENST00000418645 1148 ntBASIC28.32■■■□□ 2.12
CLTCL1P53675 AC104076.2-201ENST00000448912 469 ntBASIC28.32■■■□□ 2.12
CLTCL1P53675 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC28.32■■■□□ 2.12
CLTCL1P53675 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC28.32■■■□□ 2.12
CLTCL1P53675 EGLN1P1-201ENST00000531623 762 ntBASIC28.32■■■□□ 2.12
CLTCL1P53675 AP000692.2-201ENST00000608391 879 ntBASIC28.32■■■□□ 2.12
CLTCL1P53675 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CLTCL1P53675 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CLTCL1P53675 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
CLTCL1P53675 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
CLTCL1P53675 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC28.32■■■□□ 2.12
CLTCL1P53675 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CLTCL1P53675 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC28.31■■■□□ 2.12
CLTCL1P53675 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CLTCL1P53675 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CLTCL1P53675 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
CLTCL1P53675 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CLTCL1P53675 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.31■■■□□ 2.12
CLTCL1P53675 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.31■■■□□ 2.12
CLTCL1P53675 HIST1H2APS4-201ENST00000362070 348 ntBASIC28.31■■■□□ 2.12
CLTCL1P53675 AC091390.4-202ENST00000476426 537 ntBASIC28.31■■■□□ 2.12
CLTCL1P53675 AC022616.7-201ENST00000525383 220 ntBASIC28.31■■■□□ 2.12
CLTCL1P53675 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
CLTCL1P53675 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC28.31■■■□□ 2.12
CLTCL1P53675 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms