Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NUBP1P53384 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 Z97985.1-201ENST00000332270 946 ntBASIC19.68■□□□□ 0.74
NUBP1P53384 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NUBP1P53384 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
NUBP1P53384 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUBP1P53384 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.68■□□□□ 0.74
NUBP1P53384 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.68■□□□□ 0.74
NUBP1P53384 AL160237.2-201ENST00000556165 472 ntBASIC19.68■□□□□ 0.74
NUBP1P53384 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.68■□□□□ 0.74
NUBP1P53384 AC092723.2-201ENST00000624955 793 ntBASIC19.68■□□□□ 0.74
NUBP1P53384 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.68■□□□□ 0.74
NUBP1P53384 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUBP1P53384 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
NUBP1P53384 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.68■□□□□ 0.74
NUBP1P53384 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NUBP1P53384 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NUBP1P53384 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NUBP1P53384 AC007688.1-201ENST00000475592 759 ntBASIC19.67■□□□□ 0.74
NUBP1P53384 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NUBP1P53384 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.67■□□□□ 0.74
NUBP1P53384 AC139530.3-201ENST00000620344 690 ntBASIC19.67■□□□□ 0.74
NUBP1P53384 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.67■□□□□ 0.74
NUBP1P53384 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.67■□□□□ 0.74
NUBP1P53384 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUBP1P53384 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.66■□□□□ 0.74
NUBP1P53384 UNC93B7-201ENST00000509439 705 ntBASIC19.66■□□□□ 0.74
NUBP1P53384 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.66■□□□□ 0.74
NUBP1P53384 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.66■□□□□ 0.74
NUBP1P53384 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.66■□□□□ 0.74
NUBP1P53384 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.66■□□□□ 0.74
NUBP1P53384 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.66■□□□□ 0.74
NUBP1P53384 AC008267.7-201ENST00000624570 1194 ntBASIC19.66■□□□□ 0.74
NUBP1P53384 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.66■□□□□ 0.74
NUBP1P53384 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NUBP1P53384 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.66■□□□□ 0.74
NUBP1P53384 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUBP1P53384 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
NUBP1P53384 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NUBP1P53384 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 AC106795.1-205ENST00000512851 1056 ntBASIC19.65■□□□□ 0.74
NUBP1P53384 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 AL662844.1-201ENST00000546340 181 ntBASIC19.65■□□□□ 0.74
NUBP1P53384 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NUBP1P53384 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.65■□□□□ 0.74
NUBP1P53384 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
NUBP1P53384 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NUBP1P53384 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUBP1P53384 AC127496.7-201ENST00000625110 1798 ntBASIC19.65■□□□□ 0.74
NUBP1P53384 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUBP1P53384 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUBP1P53384 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUBP1P53384 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.64■□□□□ 0.73
NUBP1P53384 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC19.64■□□□□ 0.73
NUBP1P53384 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.64■□□□□ 0.73
NUBP1P53384 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC19.64■□□□□ 0.73
NUBP1P53384 AC107308.1-201ENST00000615897 301 ntBASIC19.64■□□□□ 0.73
NUBP1P53384 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC19.64■□□□□ 0.73
NUBP1P53384 HLA-A-209ENST00000638375 975 ntBASIC19.64■□□□□ 0.73
NUBP1P53384 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.64■□□□□ 0.73
NUBP1P53384 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms