Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF4P48230 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.67■■□□□ 1.22
TM4SF4P48230 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TM4SF4P48230 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
TM4SF4P48230 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TM4SF4P48230 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 AC121338.2-201ENST00000622535 1744 ntBASIC22.66■■□□□ 1.22
TM4SF4P48230 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.66■■□□□ 1.22
TM4SF4P48230 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.66■■□□□ 1.22
TM4SF4P48230 GPALPP1-207ENST00000611650 899 ntBASIC22.66■■□□□ 1.22
TM4SF4P48230 CR769767.2-201ENST00000622735 460 ntBASIC22.66■■□□□ 1.22
TM4SF4P48230 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TM4SF4P48230 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.66■■□□□ 1.22
TM4SF4P48230 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TM4SF4P48230 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF4P48230 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 KRT17P6-201ENST00000453795 1220 ntBASIC22.65■■□□□ 1.22
TM4SF4P48230 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF4P48230 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.65■■□□□ 1.22
TM4SF4P48230 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TM4SF4P48230 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.65■■□□□ 1.22
TM4SF4P48230 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
TM4SF4P48230 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF4P48230 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TM4SF4P48230 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.65■■□□□ 1.22
TM4SF4P48230 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
TM4SF4P48230 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TM4SF4P48230 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TM4SF4P48230 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.64■■□□□ 1.22
TM4SF4P48230 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.64■■□□□ 1.21
TM4SF4P48230 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF4P48230 STARP1-201ENST00000397973 869 ntBASIC22.64■■□□□ 1.21
TM4SF4P48230 SKP2-204ENST00000508514 821 ntTSL 3 BASIC22.64■■□□□ 1.21
TM4SF4P48230 AP003041.3-201ENST00000527151 707 ntBASIC22.64■■□□□ 1.21
TM4SF4P48230 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.64■■□□□ 1.21
TM4SF4P48230 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.64■■□□□ 1.21
TM4SF4P48230 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TM4SF4P48230 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF4P48230 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.64■■□□□ 1.21
TM4SF4P48230 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TM4SF4P48230 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF4P48230 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.63■■□□□ 1.21
TM4SF4P48230 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF4P48230 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.63■■□□□ 1.21
TM4SF4P48230 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 PRR29-207ENST00000580752 458 ntTSL 3 BASIC22.63■■□□□ 1.21
TM4SF4P48230 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF4P48230 C9orf163-202ENST00000624034 2573 ntBASIC22.63■■□□□ 1.21
TM4SF4P48230 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
TM4SF4P48230 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TM4SF4P48230 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.63■■□□□ 1.21
TM4SF4P48230 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TM4SF4P48230 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TM4SF4P48230 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TM4SF4P48230 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.62■■□□□ 1.21
TM4SF4P48230 AP000523.1-201ENST00000398242 1049 ntBASIC22.62■■□□□ 1.21
TM4SF4P48230 MIR3652-201ENST00000579335 131 ntBASIC22.62■■□□□ 1.21
TM4SF4P48230 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TM4SF4P48230 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
TM4SF4P48230 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TM4SF4P48230 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.62■■□□□ 1.21
TM4SF4P48230 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TM4SF4P48230 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TM4SF4P48230 KRT8P45-201ENST00000414328 1447 ntBASIC22.62■■□□□ 1.21
TM4SF4P48230 LINC01311-201ENST00000565162 1445 ntBASIC22.62■■□□□ 1.21
TM4SF4P48230 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.62■■□□□ 1.21
TM4SF4P48230 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TM4SF4P48230 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TM4SF4P48230 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC22.61■■□□□ 1.21
TM4SF4P48230 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TM4SF4P48230 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TM4SF4P48230 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.61■■□□□ 1.21
TM4SF4P48230 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TM4SF4P48230 AL845331.1-201ENST00000424978 1190 ntBASIC22.61■■□□□ 1.21
TM4SF4P48230 KRT16P6-202ENST00000425692 1426 ntBASIC22.61■■□□□ 1.21
TM4SF4P48230 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC22.61■■□□□ 1.21
TM4SF4P48230 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.61■■□□□ 1.21
TM4SF4P48230 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms