Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.02■□□□□ 0.32
CD40P25942 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.02■□□□□ 0.32
CD40P25942 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.02■□□□□ 0.32
CD40P25942 AC026471.5-201ENST00000615068 467 ntBASIC17.02■□□□□ 0.32
CD40P25942 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CD40P25942 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CD40P25942 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.02■□□□□ 0.31
CD40P25942 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CD40P25942 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD40P25942 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CD40P25942 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CD40P25942 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.01■□□□□ 0.31
CD40P25942 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 AL512408.1-201ENST00000569378 2000 ntBASIC17.01■□□□□ 0.31
CD40P25942 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CD40P25942 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.01■□□□□ 0.31
CD40P25942 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.01■□□□□ 0.31
CD40P25942 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 TUBB8P6-201ENST00000436895 1288 ntBASIC17.01■□□□□ 0.31
CD40P25942 AL355355.2-201ENST00000442321 338 ntBASIC17.01■□□□□ 0.31
CD40P25942 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.01■□□□□ 0.31
CD40P25942 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.01■□□□□ 0.31
CD40P25942 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.01■□□□□ 0.31
CD40P25942 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 AC073912.3-201ENST00000624414 853 ntBASIC17.01■□□□□ 0.31
CD40P25942 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CD40P25942 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.01■□□□□ 0.31
CD40P25942 GABARAPL3-202ENST00000624044 1851 ntBASIC17.01■□□□□ 0.31
CD40P25942 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD40P25942 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD40P25942 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD40P25942 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17■□□□□ 0.31
CD40P25942 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17■□□□□ 0.31
CD40P25942 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD40P25942 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 NIFKP9-201ENST00000419265 221 ntBASIC17■□□□□ 0.31
CD40P25942 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 KRT18P16-201ENST00000510337 1294 ntBASIC17■□□□□ 0.31
CD40P25942 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17■□□□□ 0.31
CD40P25942 C1QL1P1-201ENST00000568105 661 ntBASIC17■□□□□ 0.31
CD40P25942 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CD40P25942 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
CD40P25942 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CD40P25942 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17■□□□□ 0.31
CD40P25942 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17■□□□□ 0.31
CD40P25942 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD40P25942 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.99■□□□□ 0.31
CD40P25942 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.99■□□□□ 0.31
CD40P25942 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CD40P25942 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CD40P25942 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.99■□□□□ 0.31
CD40P25942 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.99■□□□□ 0.31
CD40P25942 KSR1P1-201ENST00000446298 240 ntBASIC16.99■□□□□ 0.31
CD40P25942 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CD40P25942 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.99■□□□□ 0.31
CD40P25942 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.99■□□□□ 0.31
CD40P25942 AP003071.4-201ENST00000562276 1284 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms