Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.79■□□□□ 0.76
VCLP18206 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.79■□□□□ 0.76
VCLP18206 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VCLP18206 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.79■□□□□ 0.76
VCLP18206 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.79■□□□□ 0.76
VCLP18206 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 AC099778.1-201ENST00000568593 1911 ntBASIC19.78■□□□□ 0.76
VCLP18206 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.78■□□□□ 0.76
VCLP18206 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
VCLP18206 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 ESRRAP1-201ENST00000400596 1257 ntBASIC19.78■□□□□ 0.76
VCLP18206 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
VCLP18206 AC026366.1-201ENST00000488803 879 ntBASIC19.78■□□□□ 0.76
VCLP18206 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.78■□□□□ 0.76
VCLP18206 AC023632.3-201ENST00000521633 145 ntBASIC19.78■□□□□ 0.76
VCLP18206 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.78■□□□□ 0.76
VCLP18206 MIR4651-201ENST00000582622 73 ntBASIC19.78■□□□□ 0.76
VCLP18206 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.78■□□□□ 0.76
VCLP18206 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.78■□□□□ 0.76
VCLP18206 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VCLP18206 DPP3P2-201ENST00000416030 1696 ntBASIC19.78■□□□□ 0.76
VCLP18206 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VCLP18206 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.77■□□□□ 0.76
VCLP18206 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.77■□□□□ 0.76
VCLP18206 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.77■□□□□ 0.76
VCLP18206 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.77■□□□□ 0.76
VCLP18206 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.77■□□□□ 0.76
VCLP18206 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VCLP18206 HLA-G-202ENST00000376815 851 ntBASIC19.77■□□□□ 0.76
VCLP18206 HLA-G-203ENST00000376818 1127 ntBASIC19.77■□□□□ 0.76
VCLP18206 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 AC005829.2-201ENST00000571422 1056 ntBASIC19.77■□□□□ 0.76
VCLP18206 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
VCLP18206 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
VCLP18206 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
VCLP18206 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VCLP18206 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
VCLP18206 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.76■□□□□ 0.75
VCLP18206 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.76■□□□□ 0.75
VCLP18206 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.76■□□□□ 0.75
VCLP18206 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
VCLP18206 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
VCLP18206 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.76■□□□□ 0.75
VCLP18206 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
VCLP18206 UNC93B4-201ENST00000505679 747 ntBASIC19.76■□□□□ 0.75
VCLP18206 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 SOX15-203ENST00000570788 1093 ntBASIC19.76■□□□□ 0.75
VCLP18206 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.76■□□□□ 0.75
VCLP18206 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.76■□□□□ 0.75
VCLP18206 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCLP18206 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VCLP18206 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms