Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.61■□□□□ 0.57
NCK1P16333 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.61■□□□□ 0.57
NCK1P16333 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.61■□□□□ 0.57
NCK1P16333 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.61■□□□□ 0.57
NCK1P16333 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NCK1P16333 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.61■□□□□ 0.57
NCK1P16333 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NCK1P16333 AC026471.1-201ENST00000564629 3026 ntBASIC18.6■□□□□ 0.57
NCK1P16333 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.6■□□□□ 0.57
NCK1P16333 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NCK1P16333 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NCK1P16333 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NCK1P16333 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.59■□□□□ 0.57
NCK1P16333 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCK1P16333 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCK1P16333 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.59■□□□□ 0.57
NCK1P16333 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.59■□□□□ 0.57
NCK1P16333 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.59■□□□□ 0.57
NCK1P16333 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.59■□□□□ 0.57
NCK1P16333 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NCK1P16333 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NCK1P16333 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NCK1P16333 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NCK1P16333 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NCK1P16333 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NCK1P16333 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.58■□□□□ 0.56
NCK1P16333 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.58■□□□□ 0.56
NCK1P16333 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.58■□□□□ 0.56
NCK1P16333 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.58■□□□□ 0.56
NCK1P16333 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 UBE2DNL-204ENST00000602536 740 ntBASIC18.58■□□□□ 0.56
NCK1P16333 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.58■□□□□ 0.56
NCK1P16333 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NCK1P16333 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.56
NCK1P16333 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
NCK1P16333 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCK1P16333 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
NCK1P16333 KRT16P6-202ENST00000425692 1426 ntBASIC18.57■□□□□ 0.56
NCK1P16333 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NCK1P16333 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.57■□□□□ 0.56
NCK1P16333 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.57■□□□□ 0.56
NCK1P16333 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCK1P16333 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms