Protein–RNA interactions for Protein: P15529

CD46, Membrane cofactor protein, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD46P15529 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CD46P15529 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD46P15529 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD46P15529 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD46P15529 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CD46P15529 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD46P15529 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD46P15529 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CD46P15529 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.97■□□□□ 0.47
CD46P15529 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 KRT18P16-201ENST00000510337 1294 ntBASIC17.97■□□□□ 0.47
CD46P15529 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.97■□□□□ 0.47
CD46P15529 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD46P15529 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.97■□□□□ 0.47
CD46P15529 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CD46P15529 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CD46P15529 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD46P15529 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CD46P15529 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.96■□□□□ 0.47
CD46P15529 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CD46P15529 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.96■□□□□ 0.47
CD46P15529 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.96■□□□□ 0.47
CD46P15529 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.96■□□□□ 0.47
CD46P15529 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.96■□□□□ 0.47
CD46P15529 AC097493.4-201ENST00000641197 219 ntBASIC17.96■□□□□ 0.47
CD46P15529 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.96■□□□□ 0.47
CD46P15529 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.96■□□□□ 0.47
CD46P15529 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CD46P15529 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CD46P15529 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.96■□□□□ 0.46
CD46P15529 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CD46P15529 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 AC116562.2-201ENST00000507042 360 ntBASIC17.95■□□□□ 0.46
CD46P15529 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.95■□□□□ 0.46
CD46P15529 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CD46P15529 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 AL445675.2-201ENST00000620291 557 ntBASIC17.95■□□□□ 0.46
CD46P15529 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.95■□□□□ 0.46
CD46P15529 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CD46P15529 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CD46P15529 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CD46P15529 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CD46P15529 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CD46P15529 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.94■□□□□ 0.46
CD46P15529 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.94■□□□□ 0.46
CD46P15529 KRT18P21-201ENST00000515767 1272 ntBASIC17.94■□□□□ 0.46
CD46P15529 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.94■□□□□ 0.46
CD46P15529 AC026271.3-201ENST00000571884 352 ntBASIC17.94■□□□□ 0.46
CD46P15529 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.94■□□□□ 0.46
CD46P15529 AP000525.1-201ENST00000608286 694 ntBASIC17.94■□□□□ 0.46
CD46P15529 AC131212.4-201ENST00000623606 975 ntBASIC17.94■□□□□ 0.46
CD46P15529 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.94■□□□□ 0.46
CD46P15529 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CD46P15529 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms