Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TPM1P09493 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
TPM1P09493 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.68■■□□□ 1.06
TPM1P09493 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM1P09493 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM1P09493 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.68■■□□□ 1.06
TPM1P09493 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TPM1P09493 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM1P09493 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM1P09493 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TPM1P09493 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.67■■□□□ 1.06
TPM1P09493 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
TPM1P09493 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 KRT18P14-201ENST00000534205 1250 ntBASIC21.67■■□□□ 1.06
TPM1P09493 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.67■■□□□ 1.06
TPM1P09493 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.67■■□□□ 1.06
TPM1P09493 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TPM1P09493 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TPM1P09493 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TPM1P09493 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.66■■□□□ 1.06
TPM1P09493 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.66■■□□□ 1.06
TPM1P09493 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TPM1P09493 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TPM1P09493 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.66■■□□□ 1.06
TPM1P09493 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TPM1P09493 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TPM1P09493 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 CYP21A1P-202ENST00000354927 1481 ntBASIC21.65■■□□□ 1.06
TPM1P09493 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.65■■□□□ 1.06
TPM1P09493 KRT8P17-201ENST00000453110 1448 ntBASIC21.65■■□□□ 1.06
TPM1P09493 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.65■■□□□ 1.06
TPM1P09493 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
TPM1P09493 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.65■■□□□ 1.06
TPM1P09493 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 AL591742.1-201ENST00000604433 565 ntBASIC21.65■■□□□ 1.06
TPM1P09493 AC005837.3-201ENST00000612163 286 ntBASIC21.65■■□□□ 1.06
TPM1P09493 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.65■■□□□ 1.06
TPM1P09493 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TPM1P09493 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TPM1P09493 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TPM1P09493 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
TPM1P09493 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms