Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.65■■□□□ 1.38
APPP05067 AC124016.1-201ENST00000609552 612 ntBASIC23.65■■□□□ 1.38
APPP05067 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.65■■□□□ 1.38
APPP05067 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
APPP05067 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
APPP05067 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.38
APPP05067 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
APPP05067 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.64■■□□□ 1.38
APPP05067 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
APPP05067 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
APPP05067 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
APPP05067 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
APPP05067 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
APPP05067 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
APPP05067 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.64■■□□□ 1.38
APPP05067 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
APPP05067 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
APPP05067 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.64■■□□□ 1.37
APPP05067 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
APPP05067 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.64■■□□□ 1.37
APPP05067 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.64■■□□□ 1.37
APPP05067 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
APPP05067 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.64■■□□□ 1.37
APPP05067 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.64■■□□□ 1.37
APPP05067 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
APPP05067 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.64■■□□□ 1.37
APPP05067 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
APPP05067 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
APPP05067 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
APPP05067 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.63■■□□□ 1.37
APPP05067 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
APPP05067 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
APPP05067 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.63■■□□□ 1.37
APPP05067 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.63■■□□□ 1.37
APPP05067 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.63■■□□□ 1.37
APPP05067 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.63■■□□□ 1.37
APPP05067 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
APPP05067 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
APPP05067 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
APPP05067 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
APPP05067 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.62■■□□□ 1.37
APPP05067 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 TFP1-202ENST00000475455 1573 ntBASIC23.62■■□□□ 1.37
APPP05067 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.62■■□□□ 1.37
APPP05067 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
APPP05067 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.62■■□□□ 1.37
APPP05067 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.62■■□□□ 1.37
APPP05067 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.62■■□□□ 1.37
APPP05067 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.62■■□□□ 1.37
APPP05067 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.62■■□□□ 1.37
APPP05067 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
APPP05067 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
APPP05067 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 NBPF21P-201ENST00000425093 1451 ntBASIC23.62■■□□□ 1.37
APPP05067 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
APPP05067 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
APPP05067 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.61■■□□□ 1.37
APPP05067 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
APPP05067 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
APPP05067 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.61■■□□□ 1.37
APPP05067 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.61■■□□□ 1.37
APPP05067 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.61■■□□□ 1.37
APPP05067 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.61■■□□□ 1.37
APPP05067 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.61■■□□□ 1.37
APPP05067 AC110285.5-201ENST00000611501 352 ntBASIC23.61■■□□□ 1.37
APPP05067 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.61■■□□□ 1.37
APPP05067 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
APPP05067 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
APPP05067 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
APPP05067 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.6■■□□□ 1.37
APPP05067 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
APPP05067 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
APPP05067 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
APPP05067 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms