Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBP04114 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.38□□□□□ -0.43
APOBP04114 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
APOBP04114 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.38□□□□□ -0.43
APOBP04114 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.38□□□□□ -0.43
APOBP04114 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 HLA-G-202ENST00000376815 851 ntBASIC12.38□□□□□ -0.43
APOBP04114 HLA-G-203ENST00000376818 1127 ntBASIC12.38□□□□□ -0.43
APOBP04114 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 HOMER2P1-201ENST00000455653 964 ntBASIC12.38□□□□□ -0.43
APOBP04114 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.38□□□□□ -0.43
APOBP04114 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBP04114 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.38□□□□□ -0.43
APOBP04114 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBP04114 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.38□□□□□ -0.43
APOBP04114 LINC01465-201ENST00000408887 1940 ntBASIC12.38□□□□□ -0.43
APOBP04114 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
APOBP04114 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
APOBP04114 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBP04114 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBP04114 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.37□□□□□ -0.43
APOBP04114 AL136038.3-201ENST00000561909 1096 ntBASIC12.37□□□□□ -0.43
APOBP04114 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
APOBP04114 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOBP04114 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 AL353719.1-201ENST00000566847 864 ntBASIC12.37□□□□□ -0.43
APOBP04114 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBP04114 AC011298.2-201ENST00000617989 482 ntBASIC12.37□□□□□ -0.43
APOBP04114 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.37□□□□□ -0.43
APOBP04114 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
APOBP04114 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 CKBP1-201ENST00000565489 1086 ntBASIC12.37□□□□□ -0.43
APOBP04114 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.37□□□□□ -0.43
APOBP04114 AP006587.1-201ENST00000534129 1502 ntBASIC12.37□□□□□ -0.43
APOBP04114 TFP1-202ENST00000475455 1573 ntBASIC12.37□□□□□ -0.43
APOBP04114 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
APOBP04114 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
APOBP04114 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 AC139530.3-201ENST00000620344 690 ntBASIC12.37□□□□□ -0.43
APOBP04114 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.37□□□□□ -0.43
APOBP04114 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
APOBP04114 AP002383.4-201ENST00000442518 975 ntBASIC12.36□□□□□ -0.43
APOBP04114 AC111152.3-201ENST00000569699 673 ntBASIC12.36□□□□□ -0.43
APOBP04114 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.36□□□□□ -0.43
APOBP04114 AL732292.2-201ENST00000609649 430 ntBASIC12.36□□□□□ -0.43
APOBP04114 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.36□□□□□ -0.43
APOBP04114 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.36□□□□□ -0.43
APOBP04114 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.36□□□□□ -0.43
APOBP04114 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
APOBP04114 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12.36□□□□□ -0.43
APOBP04114 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms