Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 MMP23A-201ENST00000234610 1017 ntBASIC21.66■■□□□ 1.06
VTNP04004 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.66■■□□□ 1.06
VTNP04004 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.66■■□□□ 1.06
VTNP04004 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.66■■□□□ 1.06
VTNP04004 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.66■■□□□ 1.06
VTNP04004 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VTNP04004 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.65■■□□□ 1.06
VTNP04004 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 KRT8P9-201ENST00000558927 1449 ntBASIC21.65■■□□□ 1.06
VTNP04004 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.65■■□□□ 1.06
VTNP04004 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.65■■□□□ 1.06
VTNP04004 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.65■■□□□ 1.06
VTNP04004 UNC93B2-201ENST00000285383 730 ntBASIC21.65■■□□□ 1.06
VTNP04004 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
VTNP04004 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.65■■□□□ 1.06
VTNP04004 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.65■■□□□ 1.06
VTNP04004 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VTNP04004 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VTNP04004 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VTNP04004 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
VTNP04004 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
VTNP04004 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VTNP04004 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VTNP04004 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.64■■□□□ 1.05
VTNP04004 AC116562.2-201ENST00000507042 360 ntBASIC21.64■■□□□ 1.05
VTNP04004 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VTNP04004 KRT18P21-201ENST00000515767 1272 ntBASIC21.64■■□□□ 1.05
VTNP04004 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.64■■□□□ 1.05
VTNP04004 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VTNP04004 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.64■■□□□ 1.05
VTNP04004 AC012306.2-201ENST00000609350 630 ntBASIC21.64■■□□□ 1.05
VTNP04004 AC097493.4-201ENST00000641197 219 ntBASIC21.64■■□□□ 1.05
VTNP04004 FEM1AP1-201ENST00000431297 1995 ntBASIC21.64■■□□□ 1.05
VTNP04004 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VTNP04004 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VTNP04004 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
VTNP04004 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
VTNP04004 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.63■■□□□ 1.05
VTNP04004 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.63■■□□□ 1.05
VTNP04004 AC092667.1-201ENST00000434301 2586 ntBASIC21.63■■□□□ 1.05
VTNP04004 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 MIR1238-201ENST00000408483 83 ntBASIC21.63■■□□□ 1.05
VTNP04004 AL390955.1-201ENST00000428694 934 ntBASIC21.63■■□□□ 1.05
VTNP04004 FAM210CP-201ENST00000445714 574 ntBASIC21.63■■□□□ 1.05
VTNP04004 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.63■■□□□ 1.05
VTNP04004 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.63■■□□□ 1.05
VTNP04004 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VTNP04004 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.63■■□□□ 1.05
VTNP04004 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.62■■□□□ 1.05
VTNP04004 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.62■■□□□ 1.05
VTNP04004 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 AL445675.2-201ENST00000620291 557 ntBASIC21.62■■□□□ 1.05
VTNP04004 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.62■■□□□ 1.05
VTNP04004 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VTNP04004 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 TMEM179-206ENST00000616017 1645 ntBASIC21.62■■□□□ 1.05
VTNP04004 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VTNP04004 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTNP04004 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VTNP04004 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.61■■□□□ 1.05
VTNP04004 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.61■■□□□ 1.05
VTNP04004 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.61■■□□□ 1.05
VTNP04004 AL031985.4-201ENST00000642138 673 ntBASIC21.61■■□□□ 1.05
VTNP04004 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTNP04004 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VTNP04004 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTNP04004 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
VTNP04004 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VTNP04004 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VTNP04004 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.6■■□□□ 1.05
VTNP04004 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms