Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFBP01127 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDGFBP01127 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 KRT8P45-201ENST00000414328 1447 ntBASIC19.93■□□□□ 0.78
PDGFBP01127 KRT8P17-201ENST00000453110 1448 ntBASIC19.93■□□□□ 0.78
PDGFBP01127 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.92■□□□□ 0.78
PDGFBP01127 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.92■□□□□ 0.78
PDGFBP01127 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFBP01127 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PDGFBP01127 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFBP01127 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 PRELID1P1-202ENST00000567272 903 ntBASIC19.92■□□□□ 0.78
PDGFBP01127 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.92■□□□□ 0.78
PDGFBP01127 NPAP1P7-201ENST00000613027 823 ntBASIC19.92■□□□□ 0.78
PDGFBP01127 HYMAI.1-201ENST00000620949 238 ntBASIC19.92■□□□□ 0.78
PDGFBP01127 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFBP01127 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.92■□□□□ 0.78
PDGFBP01127 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDGFBP01127 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PDGFBP01127 TFP1-202ENST00000475455 1573 ntBASIC19.91■□□□□ 0.78
PDGFBP01127 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.91■□□□□ 0.78
PDGFBP01127 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 UNC93B7-201ENST00000509439 705 ntBASIC19.91■□□□□ 0.78
PDGFBP01127 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.91■□□□□ 0.78
PDGFBP01127 AL512604.3-201ENST00000569583 964 ntBASIC19.91■□□□□ 0.78
PDGFBP01127 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 AC116351.2-201ENST00000606540 1585 ntBASIC19.91■□□□□ 0.78
PDGFBP01127 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDGFBP01127 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFBP01127 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDGFBP01127 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PDGFBP01127 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFBP01127 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.9■□□□□ 0.78
PDGFBP01127 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFBP01127 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFBP01127 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.9■□□□□ 0.78
PDGFBP01127 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.9■□□□□ 0.78
PDGFBP01127 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDGFBP01127 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDGFBP01127 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.9■□□□□ 0.78
PDGFBP01127 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDGFBP01127 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PDGFBP01127 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
PDGFBP01127 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFBP01127 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.89■□□□□ 0.77
PDGFBP01127 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.89■□□□□ 0.77
PDGFBP01127 MIR3652-201ENST00000579335 131 ntBASIC19.89■□□□□ 0.77
PDGFBP01127 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDGFBP01127 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PDGFBP01127 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFBP01127 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.89■□□□□ 0.77
PDGFBP01127 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
PDGFBP01127 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDGFBP01127 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDGFBP01127 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.88■□□□□ 0.77
PDGFBP01127 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
PDGFBP01127 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms