Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
GGPS1O95749 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
GGPS1O95749 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
GGPS1O95749 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
GGPS1O95749 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.17■■□□□ 1.14
GGPS1O95749 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 MMP23A-201ENST00000234610 1017 ntBASIC22.17■■□□□ 1.14
GGPS1O95749 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.17■■□□□ 1.14
GGPS1O95749 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.17■■□□□ 1.14
GGPS1O95749 FAM210CP-201ENST00000445714 574 ntBASIC22.17■■□□□ 1.14
GGPS1O95749 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.17■■□□□ 1.14
GGPS1O95749 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
GGPS1O95749 AC012306.2-201ENST00000609350 630 ntBASIC22.17■■□□□ 1.14
GGPS1O95749 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.17■■□□□ 1.14
GGPS1O95749 AC097493.4-201ENST00000641197 219 ntBASIC22.17■■□□□ 1.14
GGPS1O95749 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
GGPS1O95749 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
GGPS1O95749 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 AC079598.2-202ENST00000546624 1451 ntBASIC22.16■■□□□ 1.14
GGPS1O95749 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.16■■□□□ 1.14
GGPS1O95749 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
GGPS1O95749 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.16■■□□□ 1.14
GGPS1O95749 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.16■■□□□ 1.14
GGPS1O95749 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.16■■□□□ 1.14
GGPS1O95749 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
GGPS1O95749 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
GGPS1O95749 LINC01521-201ENST00000504184 1943 ntBASIC22.16■■□□□ 1.14
GGPS1O95749 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.15■■□□□ 1.14
GGPS1O95749 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.15■■□□□ 1.14
GGPS1O95749 SLC25A24-204ENST00000569674 2357 ntBASIC22.15■■□□□ 1.14
GGPS1O95749 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.15■■□□□ 1.14
GGPS1O95749 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
GGPS1O95749 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.15■■□□□ 1.14
GGPS1O95749 KRT18P16-201ENST00000510337 1294 ntBASIC22.15■■□□□ 1.14
GGPS1O95749 AP000525.1-201ENST00000608286 694 ntBASIC22.15■■□□□ 1.14
GGPS1O95749 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.15■■□□□ 1.14
GGPS1O95749 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
GGPS1O95749 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.15■■□□□ 1.14
GGPS1O95749 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
GGPS1O95749 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
GGPS1O95749 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
GGPS1O95749 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
GGPS1O95749 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
GGPS1O95749 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
GGPS1O95749 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.14■■□□□ 1.14
GGPS1O95749 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.14■■□□□ 1.13
GGPS1O95749 BX119927.1-201ENST00000636596 1552 ntBASIC22.14■■□□□ 1.13
GGPS1O95749 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GGPS1O95749 UNC93B2-201ENST00000285383 730 ntBASIC22.14■■□□□ 1.13
GGPS1O95749 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.14■■□□□ 1.13
GGPS1O95749 KRT18P21-201ENST00000515767 1272 ntBASIC22.14■■□□□ 1.13
GGPS1O95749 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GGPS1O95749 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.14■■□□□ 1.13
GGPS1O95749 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
GGPS1O95749 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.14■■□□□ 1.13
GGPS1O95749 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
GGPS1O95749 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
GGPS1O95749 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.14■■□□□ 1.13
GGPS1O95749 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.14■■□□□ 1.13
GGPS1O95749 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GGPS1O95749 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
GGPS1O95749 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
GGPS1O95749 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
GGPS1O95749 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
GGPS1O95749 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.13■■□□□ 1.13
GGPS1O95749 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
GGPS1O95749 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.13■■□□□ 1.13
GGPS1O95749 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.13■■□□□ 1.13
GGPS1O95749 TUBB8P6-201ENST00000436895 1288 ntBASIC22.13■■□□□ 1.13
GGPS1O95749 AC116562.2-201ENST00000507042 360 ntBASIC22.13■■□□□ 1.13
GGPS1O95749 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.13■■□□□ 1.13
GGPS1O95749 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22.13■■□□□ 1.13
GGPS1O95749 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms