Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL121829.2-201ENST00000620908 328 ntBASIC18.23■□□□□ 0.51
NKX2-2O95096 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NKX2-2O95096 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NKX2-2O95096 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NKX2-2O95096 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
NKX2-2O95096 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
NKX2-2O95096 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.22■□□□□ 0.51
NKX2-2O95096 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.22■□□□□ 0.51
NKX2-2O95096 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.22■□□□□ 0.51
NKX2-2O95096 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.22■□□□□ 0.51
NKX2-2O95096 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.22■□□□□ 0.51
NKX2-2O95096 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.22■□□□□ 0.51
NKX2-2O95096 AC008403.3-201ENST00000598924 454 ntBASIC18.22■□□□□ 0.51
NKX2-2O95096 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NKX2-2O95096 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.22■□□□□ 0.51
NKX2-2O95096 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NKX2-2O95096 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.21■□□□□ 0.51
NKX2-2O95096 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NKX2-2O95096 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.21■□□□□ 0.51
NKX2-2O95096 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 POM121L13P-201ENST00000422362 380 ntBASIC18.21■□□□□ 0.51
NKX2-2O95096 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.21■□□□□ 0.51
NKX2-2O95096 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NKX2-2O95096 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.21■□□□□ 0.51
NKX2-2O95096 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.21■□□□□ 0.51
NKX2-2O95096 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.21■□□□□ 0.51
NKX2-2O95096 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
NKX2-2O95096 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NKX2-2O95096 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.21■□□□□ 0.51
NKX2-2O95096 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NKX2-2O95096 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
NKX2-2O95096 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NKX2-2O95096 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.2■□□□□ 0.5
NKX2-2O95096 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.2■□□□□ 0.5
NKX2-2O95096 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.2■□□□□ 0.5
NKX2-2O95096 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.2■□□□□ 0.5
NKX2-2O95096 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NKX2-2O95096 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NKX2-2O95096 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.2■□□□□ 0.5
NKX2-2O95096 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.2■□□□□ 0.5
NKX2-2O95096 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX2-2O95096 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX2-2O95096 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX2-2O95096 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
NKX2-2O95096 AP003097.1-201ENST00000530657 1135 ntBASIC18.19■□□□□ 0.5
NKX2-2O95096 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NKX2-2O95096 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX2-2O95096 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.19■□□□□ 0.5
NKX2-2O95096 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.19■□□□□ 0.5
NKX2-2O95096 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.19■□□□□ 0.5
NKX2-2O95096 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NKX2-2O95096 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NKX2-2O95096 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NKX2-2O95096 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NKX2-2O95096 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NKX2-2O95096 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.18■□□□□ 0.5
NKX2-2O95096 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NKX2-2O95096 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms