Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC26.29■■□□□ 1.8
LTN1O94822 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC26.29■■□□□ 1.8
LTN1O94822 AC063952.2-201ENST00000498792 1227 ntBASIC26.29■■□□□ 1.8
LTN1O94822 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LTN1O94822 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LTN1O94822 AP001271.2-201ENST00000624018 1556 ntBASIC26.28■■□□□ 1.8
LTN1O94822 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LTN1O94822 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC26.28■■□□□ 1.8
LTN1O94822 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LTN1O94822 GLRB-205ENST00000512619 728 ntTSL 3 BASIC26.28■■□□□ 1.8
LTN1O94822 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.28■■□□□ 1.8
LTN1O94822 CYGB-204ENST00000589342 815 ntTSL 3 BASIC26.28■■□□□ 1.8
LTN1O94822 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.28■■□□□ 1.8
LTN1O94822 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LTN1O94822 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LTN1O94822 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
LTN1O94822 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.28■■□□□ 1.8
LTN1O94822 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC26.28■■□□□ 1.8
LTN1O94822 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LTN1O94822 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LTN1O94822 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LTN1O94822 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LTN1O94822 AC007663.1-201ENST00000438948 1240 ntBASIC26.28■■□□□ 1.8
LTN1O94822 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC26.28■■□□□ 1.8
LTN1O94822 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
LTN1O94822 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC26.27■■□□□ 1.8
LTN1O94822 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LTN1O94822 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 ANKRD20A18P-201ENST00000359341 492 ntBASIC26.27■■□□□ 1.8
LTN1O94822 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC26.27■■□□□ 1.8
LTN1O94822 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
LTN1O94822 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC26.27■■□□□ 1.8
LTN1O94822 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
LTN1O94822 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.27■■□□□ 1.8
LTN1O94822 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
LTN1O94822 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
LTN1O94822 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC26.26■■□□□ 1.79
LTN1O94822 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.26■■□□□ 1.79
LTN1O94822 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
LTN1O94822 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.26■■□□□ 1.79
LTN1O94822 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
LTN1O94822 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 YBX1P2-201ENST00000489612 999 ntBASIC26.25■■□□□ 1.79
LTN1O94822 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
LTN1O94822 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.25■■□□□ 1.79
LTN1O94822 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC26.25■■□□□ 1.79
LTN1O94822 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
LTN1O94822 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.25■■□□□ 1.79
LTN1O94822 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.25■■□□□ 1.79
LTN1O94822 ATP5G1P1-201ENST00000448724 379 ntBASIC26.25■■□□□ 1.79
LTN1O94822 AC091390.4-202ENST00000476426 537 ntBASIC26.25■■□□□ 1.79
LTN1O94822 AP000692.2-201ENST00000608391 879 ntBASIC26.25■■□□□ 1.79
LTN1O94822 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
LTN1O94822 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LTN1O94822 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC26.24■■□□□ 1.79
LTN1O94822 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
LTN1O94822 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.24■■□□□ 1.79
LTN1O94822 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
LTN1O94822 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LTN1O94822 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms