Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
XRCC2O43543 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.12■□□□□ 0.33
XRCC2O43543 AC097658.1-201ENST00000475555 843 ntBASIC17.12■□□□□ 0.33
XRCC2O43543 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.12■□□□□ 0.33
XRCC2O43543 AC005829.2-201ENST00000571422 1056 ntBASIC17.12■□□□□ 0.33
XRCC2O43543 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
XRCC2O43543 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.12■□□□□ 0.33
XRCC2O43543 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.12■□□□□ 0.33
XRCC2O43543 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
XRCC2O43543 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XRCC2O43543 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.11■□□□□ 0.33
XRCC2O43543 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
XRCC2O43543 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.11■□□□□ 0.33
XRCC2O43543 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.11■□□□□ 0.33
XRCC2O43543 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.11■□□□□ 0.33
XRCC2O43543 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.11■□□□□ 0.33
XRCC2O43543 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
XRCC2O43543 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XRCC2O43543 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 AC125437.2-201ENST00000625180 2167 ntBASIC17.11■□□□□ 0.33
XRCC2O43543 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XRCC2O43543 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.1■□□□□ 0.33
XRCC2O43543 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.1■□□□□ 0.33
XRCC2O43543 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.1■□□□□ 0.33
XRCC2O43543 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.1■□□□□ 0.33
XRCC2O43543 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
XRCC2O43543 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.1■□□□□ 0.33
XRCC2O43543 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
XRCC2O43543 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
XRCC2O43543 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
XRCC2O43543 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
XRCC2O43543 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
XRCC2O43543 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
XRCC2O43543 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.09■□□□□ 0.33
XRCC2O43543 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.09■□□□□ 0.33
XRCC2O43543 AL138781.1-201ENST00000566567 1274 ntBASIC17.09■□□□□ 0.33
XRCC2O43543 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.09■□□□□ 0.33
XRCC2O43543 AL109923.1-201ENST00000618799 583 ntBASIC17.09■□□□□ 0.33
XRCC2O43543 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
XRCC2O43543 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.09■□□□□ 0.33
XRCC2O43543 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms