Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.69■□□□□ 0.26
KCNAB3O43448 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.69■□□□□ 0.26
KCNAB3O43448 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.69■□□□□ 0.26
KCNAB3O43448 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.69■□□□□ 0.26
KCNAB3O43448 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.69■□□□□ 0.26
KCNAB3O43448 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.69■□□□□ 0.26
KCNAB3O43448 AC005181.1-201ENST00000604782 1256 ntBASIC16.69■□□□□ 0.26
KCNAB3O43448 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.69■□□□□ 0.26
KCNAB3O43448 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KCNAB3O43448 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.69■□□□□ 0.26
KCNAB3O43448 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.69■□□□□ 0.26
KCNAB3O43448 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KCNAB3O43448 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.68■□□□□ 0.26
KCNAB3O43448 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 AC073210.2-201ENST00000430369 194 ntBASIC16.68■□□□□ 0.26
KCNAB3O43448 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.68■□□□□ 0.26
KCNAB3O43448 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.68■□□□□ 0.26
KCNAB3O43448 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.68■□□□□ 0.26
KCNAB3O43448 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.68■□□□□ 0.26
KCNAB3O43448 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 MFSD11-216ENST00000590393 1141 ntBASIC16.68■□□□□ 0.26
KCNAB3O43448 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.68■□□□□ 0.26
KCNAB3O43448 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KCNAB3O43448 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 AC092720.2-201ENST00000602388 1665 ntBASIC16.68■□□□□ 0.26
KCNAB3O43448 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
KCNAB3O43448 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KCNAB3O43448 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
KCNAB3O43448 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.67■□□□□ 0.26
KCNAB3O43448 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KCNAB3O43448 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.67■□□□□ 0.26
KCNAB3O43448 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 AC092118.2-201ENST00000613495 667 ntBASIC16.67■□□□□ 0.26
KCNAB3O43448 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KCNAB3O43448 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.67■□□□□ 0.26
KCNAB3O43448 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KCNAB3O43448 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KCNAB3O43448 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.66■□□□□ 0.26
KCNAB3O43448 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KCNAB3O43448 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNAB3O43448 KRT18P21-201ENST00000515767 1272 ntBASIC16.66■□□□□ 0.26
KCNAB3O43448 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNAB3O43448 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNAB3O43448 AC142381.4-202ENST00000563973 229 ntBASIC16.66■□□□□ 0.26
KCNAB3O43448 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.66■□□□□ 0.26
KCNAB3O43448 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.66■□□□□ 0.26
KCNAB3O43448 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.66■□□□□ 0.26
KCNAB3O43448 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms