Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN6O15212 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN6O15212 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN6O15212 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN6O15212 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PFDN6O15212 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PFDN6O15212 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.73■□□□□ 0.75
PFDN6O15212 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PFDN6O15212 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PFDN6O15212 AC073210.2-201ENST00000430369 194 ntBASIC19.73■□□□□ 0.75
PFDN6O15212 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PFDN6O15212 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.73■□□□□ 0.75
PFDN6O15212 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PFDN6O15212 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.73■□□□□ 0.75
PFDN6O15212 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PFDN6O15212 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PFDN6O15212 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.72■□□□□ 0.75
PFDN6O15212 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.72■□□□□ 0.75
PFDN6O15212 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PFDN6O15212 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.72■□□□□ 0.75
PFDN6O15212 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.72■□□□□ 0.75
PFDN6O15212 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.72■□□□□ 0.75
PFDN6O15212 AC005829.2-201ENST00000571422 1056 ntBASIC19.72■□□□□ 0.75
PFDN6O15212 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PFDN6O15212 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PFDN6O15212 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.71■□□□□ 0.75
PFDN6O15212 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.71■□□□□ 0.75
PFDN6O15212 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.71■□□□□ 0.75
PFDN6O15212 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.71■□□□□ 0.75
PFDN6O15212 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PFDN6O15212 AL138781.1-201ENST00000566567 1274 ntBASIC19.71■□□□□ 0.75
PFDN6O15212 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.71■□□□□ 0.75
PFDN6O15212 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.71■□□□□ 0.75
PFDN6O15212 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.71■□□□□ 0.75
PFDN6O15212 AL109923.1-201ENST00000618799 583 ntBASIC19.71■□□□□ 0.75
PFDN6O15212 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.71■□□□□ 0.75
PFDN6O15212 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.71■□□□□ 0.75
PFDN6O15212 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PFDN6O15212 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PFDN6O15212 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PFDN6O15212 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.7■□□□□ 0.74
PFDN6O15212 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 AFG3L1P-217ENST00000557444 2447 ntBASIC19.7■□□□□ 0.74
PFDN6O15212 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.7■□□□□ 0.74
PFDN6O15212 GUSBP6-202ENST00000438529 1198 ntBASIC19.7■□□□□ 0.74
PFDN6O15212 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.7■□□□□ 0.74
PFDN6O15212 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.7■□□□□ 0.74
PFDN6O15212 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PFDN6O15212 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PFDN6O15212 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms