Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
AP3D1O14617 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.41■□□□□ 0.54
AP3D1O14617 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
AP3D1O14617 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
AP3D1O14617 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.41■□□□□ 0.54
AP3D1O14617 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP3D1O14617 KRT17P1-201ENST00000399211 1546 ntBASIC18.41■□□□□ 0.54
AP3D1O14617 CROCCP5-201ENST00000436658 830 ntBASIC18.41■□□□□ 0.54
AP3D1O14617 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP3D1O14617 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
AP3D1O14617 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AP3D1O14617 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3D1O14617 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3D1O14617 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AP3D1O14617 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.4■□□□□ 0.54
AP3D1O14617 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.4■□□□□ 0.54
AP3D1O14617 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.4■□□□□ 0.54
AP3D1O14617 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.4■□□□□ 0.54
AP3D1O14617 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.4■□□□□ 0.54
AP3D1O14617 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AP3D1O14617 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
AP3D1O14617 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
AP3D1O14617 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.54
AP3D1O14617 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.39■□□□□ 0.53
AP3D1O14617 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3D1O14617 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
AP3D1O14617 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3D1O14617 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.39■□□□□ 0.53
AP3D1O14617 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 AC133552.2-202ENST00000575694 574 ntBASIC18.39■□□□□ 0.53
AP3D1O14617 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.39■□□□□ 0.53
AP3D1O14617 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
AP3D1O14617 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.39■□□□□ 0.53
AP3D1O14617 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AP3D1O14617 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.38■□□□□ 0.53
AP3D1O14617 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 AC125437.2-201ENST00000625180 2167 ntBASIC18.38■□□□□ 0.53
AP3D1O14617 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 AL512625.2-201ENST00000417533 625 ntBASIC18.38■□□□□ 0.53
AP3D1O14617 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.38■□□□□ 0.53
AP3D1O14617 AC105036.2-201ENST00000569468 176 ntBASIC18.38■□□□□ 0.53
AP3D1O14617 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP3D1O14617 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AP3D1O14617 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AP3D1O14617 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AP3D1O14617 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms