Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNA5SP413-201ENST00000516373 109 ntBASIC19.22■□□□□ 0.67
E2F3O00716 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
E2F3O00716 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.22■□□□□ 0.67
E2F3O00716 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
E2F3O00716 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
E2F3O00716 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
E2F3O00716 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
E2F3O00716 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.21■□□□□ 0.67
E2F3O00716 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
E2F3O00716 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.21■□□□□ 0.67
E2F3O00716 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.21■□□□□ 0.67
E2F3O00716 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
E2F3O00716 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
E2F3O00716 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
E2F3O00716 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
E2F3O00716 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
E2F3O00716 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
E2F3O00716 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.2■□□□□ 0.66
E2F3O00716 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
E2F3O00716 PRORSD1P-201ENST00000295112 541 ntBASIC19.2■□□□□ 0.66
E2F3O00716 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.2■□□□□ 0.66
E2F3O00716 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.2■□□□□ 0.66
E2F3O00716 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
E2F3O00716 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.2■□□□□ 0.66
E2F3O00716 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
E2F3O00716 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.2■□□□□ 0.66
E2F3O00716 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
E2F3O00716 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
E2F3O00716 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
E2F3O00716 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.2■□□□□ 0.66
E2F3O00716 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.19■□□□□ 0.66
E2F3O00716 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.19■□□□□ 0.66
E2F3O00716 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
E2F3O00716 AC092118.2-201ENST00000613495 667 ntBASIC19.19■□□□□ 0.66
E2F3O00716 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
E2F3O00716 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.19■□□□□ 0.66
E2F3O00716 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
E2F3O00716 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.19■□□□□ 0.66
E2F3O00716 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
E2F3O00716 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
E2F3O00716 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
E2F3O00716 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.18■□□□□ 0.66
E2F3O00716 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
E2F3O00716 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.18■□□□□ 0.66
E2F3O00716 KRT18P29-201ENST00000397031 1267 ntBASIC19.18■□□□□ 0.66
E2F3O00716 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
E2F3O00716 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.18■□□□□ 0.66
E2F3O00716 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.18■□□□□ 0.66
E2F3O00716 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.18■□□□□ 0.66
E2F3O00716 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.18■□□□□ 0.66
E2F3O00716 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.18■□□□□ 0.66
E2F3O00716 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
E2F3O00716 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
E2F3O00716 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.18■□□□□ 0.66
E2F3O00716 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.17■□□□□ 0.66
E2F3O00716 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
E2F3O00716 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
E2F3O00716 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.17■□□□□ 0.66
E2F3O00716 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
E2F3O00716 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms