Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 AC092647.4-201ENST00000457211 535 ntBASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 FAM86EP-206ENST00000510506 987 ntBASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PLEKHD1A6NEE1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 Z85996.1-201ENST00000494644 937 ntBASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.5■■■□□ 2.47
PLEKHD1A6NEE1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 AL121956.5-201ENST00000625261 221 ntBASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.49■■■□□ 2.47
PLEKHD1A6NEE1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 TSPY17P-201ENST00000450329 467 ntBASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 AL121894.2-201ENST00000602977 491 ntBASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC30.48■■■□□ 2.47
PLEKHD1A6NEE1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 AL117328.2-201ENST00000624617 1940 ntBASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 PCED1CP-201ENST00000419887 785 ntBASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PLEKHD1A6NEE1 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PLEKHD1A6NEE1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 AL353719.1-201ENST00000566847 864 ntBASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC30.45■■■□□ 2.47
PLEKHD1A6NEE1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC30.45■■■□□ 2.46
PLEKHD1A6NEE1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 AL031432.5-201ENST00000641059 760 ntBASIC30.44■■■□□ 2.46
PLEKHD1A6NEE1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 ANKRD20A18P-201ENST00000359341 492 ntBASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
PLEKHD1A6NEE1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms