Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 AC008403.3-201ENST00000598924 454 ntBASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FAM197Y4-202ENST00000622692 608 ntBASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TCRBV4S1A1TA0A5B7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.83■□□□□ 0.13
TCRBV4S1A1TA0A5B7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TCRBV4S1A1TA0A5B7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.83■□□□□ 0.12
TCRBV4S1A1TA0A5B7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AL390719.1-204ENST00000412397 1219 ntBASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.82■□□□□ 0.12
TCRBV4S1A1TA0A5B7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 KRT8P36-201ENST00000489121 1440 ntBASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.81■□□□□ 0.12
TCRBV4S1A1TA0A5B7 C1QBPP2-201ENST00000528754 825 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms