Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
LOC102724428A0A0B4J2F2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 AL023803.3-201ENST00000615559 522 ntBASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC141257.4-201ENST00000634557 245 ntBASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC136944.6-201ENST00000634818 245 ntBASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.22■■□□□ 1.63
LOC102724428A0A0B4J2F2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC092647.4-201ENST00000457211 535 ntBASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 AL121894.2-201ENST00000602977 491 ntBASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC011558.1-201ENST00000623459 338 ntBASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
LOC102724428A0A0B4J2F2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
LOC102724428A0A0B4J2F2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.2■■□□□ 1.63
LOC102724428A0A0B4J2F2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.2■■□□□ 1.63
LOC102724428A0A0B4J2F2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 Z85996.1-201ENST00000494644 937 ntBASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 KRT126P-201ENST00000549467 1181 ntBASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LOC102724428A0A0B4J2F2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 FAM86EP-206ENST00000510506 987 ntBASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC25.19■■□□□ 1.62
LOC102724428A0A0B4J2F2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 EP400NL-214ENST00000641289 2402 ntBASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
LOC102724428A0A0B4J2F2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 AF106564.1-201ENST00000607058 2553 ntBASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 PCED1CP-201ENST00000419887 785 ntBASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LOC102724428A0A0B4J2F2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms