Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC025768.1-201ENST00000510057 267 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC010343.2-201ENST00000510162 224 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 UGT2A3P7-201ENST00000510485 734 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 SETP21-201ENST00000514799 892 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 SNORA70.17-201ENST00000516449 133 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AL121594.4-201ENST00000556211 1196 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC067773.1-201ENST00000603284 1094 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC009120.7-201ENST00000623452 780 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 AC004777.1-201ENST00000624317 287 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 SNX18P3-202ENST00000565670 1750 ntBASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.32□□□□□ -1.24
CTDP1Q9Y5B0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 RNU6-819P-201ENST00000364116 107 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AL050335.1-201ENST00000396909 869 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AL389925.1-201ENST00000432257 728 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC106800.2-201ENST00000514009 1103 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 HNRNPRP2-201ENST00000528421 743 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 OR4A13P-201ENST00000529316 942 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 MIR7159-201ENST00000620587 66 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC009120.2-204ENST00000621548 2032 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC016251.2-201ENST00000623393 3089 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC006213.6-201ENST00000623722 4179 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AC025809.2-201ENST00000625085 1802 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 AL137141.1-201ENST00000624622 4836 ntBASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
CTDP1Q9Y5B0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 RNA5SP346-201ENST00000363541 121 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 RPL7P58-201ENST00000402913 758 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 PNKDP1-201ENST00000435914 430 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AL590399.4-201ENST00000436561 601 ntBASIC7.3□□□□□ -1.24
CTDP1Q9Y5B0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms