Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
RIMBP3Q9UFD9 MIR541-201ENST00000401360 84 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL591848.1-201ENST00000413092 322 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL713922.1-201ENST00000416477 747 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 FTH1P8-201ENST00000498161 514 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 RN7SKP99-201ENST00000517028 307 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC011447.6-201ENST00000623510 2598 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 FTX-215ENST00000638681 9771 ntTSL 5 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 SPATA31B1P-201ENST00000434692 4016 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 RPS6P23-201ENST00000413224 722 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC092106.1-201ENST00000444291 373 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 RPL10P17-201ENST00000453852 316 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC109635.6-201ENST00000525487 1113 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 EDDM3DP-201ENST00000554692 434 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC021483.2-201ENST00000567415 758 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 AL161637.1-201ENST00000622380 412 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 IMMTP1-201ENST00000435590 2219 ntBASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.05□□□□□ -0.96
RIMBP3Q9UFD9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 IRF5P1-201ENST00000504852 2164 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 MIPEPP2-201ENST00000422560 1819 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 RNU1-85P-201ENST00000364127 164 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 RNA5SP332-201ENST00000391063 115 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC069213.2-201ENST00000420238 366 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC009480.2-201ENST00000422916 432 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AC093799.2-201ENST00000610062 578 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 CREM-208ENST00000361599 2170 ntTSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC9.04□□□□□ -0.96
RIMBP3Q9UFD9 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 MAPK10-338ENST00000641647 3362 ntBASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 SNORA58-201ENST00000505219 137 ntBASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 AC025574.2-201ENST00000615621 514 ntBASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
RIMBP3Q9UFD9 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms