Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 AC012078.1-201ENST00000405035 1646 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 CASC19-260ENST00000641828 2001 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 EIF3EP1-201ENST00000433978 1316 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 RNA5SP198-201ENST00000410376 127 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 METTL15P3-201ENST00000415522 1221 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 PSMD10P2-201ENST00000432890 672 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC007383.1-201ENST00000445875 636 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC097359.1-201ENST00000447946 463 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 H3F3AP5-201ENST00000475267 429 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 PFN1P6-201ENST00000476786 399 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC092865.4-201ENST00000477936 615 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC108103.1-201ENST00000511286 446 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC138517.1-201ENST00000515724 568 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 RNA5SP96-201ENST00000516041 107 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 NPIPB14P-203ENST00000532298 987 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 WBP1LP11-201ENST00000586141 328 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AL109924.4-201ENST00000623089 670 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 BCORP1-203ENST00000513194 5093 ntBASIC5.59□□□□□ -1.51
THUMPD1Q9NXG2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.59□□□□□ -1.52
THUMPD1Q9NXG2 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
THUMPD1Q9NXG2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC096632.2-201ENST00000438139 1239 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AL356121.1-201ENST00000442911 156 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 Z83838.1-202ENST00000456225 839 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC004890.1-201ENST00000461005 181 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 RPL12P30-201ENST00000488389 499 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AP002453.1-201ENST00000492327 668 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 KATNBL1P4-201ENST00000503545 918 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 OR7E158P-201ENST00000524483 910 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC110056.1-201ENST00000525759 911 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 NANOGP3-201ENST00000605855 286 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC120036.2-201ENST00000509729 1474 ntBASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.58□□□□□ -1.52
THUMPD1Q9NXG2 GNL2P1-201ENST00000451274 2190 ntBASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 AC027279.4-201ENST00000624371 2072 ntBASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
THUMPD1Q9NXG2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms