Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC130360.2-201ENST00000533477 1556 ntBASIC6.06□□□□□ -1.44
PARPBPQ9NWS1 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PARPBPQ9NWS1 AC005261.4-201ENST00000600047 1385 ntBASIC6.06□□□□□ -1.44
PARPBPQ9NWS1 CASC19-255ENST00000641733 1385 ntBASIC6.06□□□□□ -1.44
PARPBPQ9NWS1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC079248.1-201ENST00000427568 1546 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 RNU5B-4P-201ENST00000363508 111 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 RN7SKP130-201ENST00000364924 301 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL079341.1-201ENST00000404701 1207 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SNORA79B-201ENST00000410557 148 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 Y_RNA.619-201ENST00000410951 90 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC046176.1-201ENST00000435260 1170 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 FABP5P3-201ENST00000437960 408 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC044797.1-201ENST00000445744 679 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC073387.1-201ENST00000453261 709 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 OR9N1P-202ENST00000494289 481 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC008868.1-201ENST00000509786 737 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SNX18P25-201ENST00000510539 758 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC117532.1-201ENST00000514638 323 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 IGKV2D-38-201ENST00000518423 240 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 OR4A2P-201ENST00000527276 913 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC092375.1-201ENST00000550410 637 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC016839.1-201ENST00000578162 867 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC068790.6-201ENST00000602558 258 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AP002802.2-201ENST00000605877 235 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL353600.1-201ENST00000608148 251 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 PTCHD3P1-201ENST00000612350 537 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MIR6774-201ENST00000614651 70 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 AC104985.3-201ENST00000623479 597 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 MTND4P26-201ENST00000415971 1359 ntBASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PARPBPQ9NWS1 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 AL022323.4-201ENST00000623980 13120 ntBASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PARPBPQ9NWS1 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms