Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 GNG5P1-201ENST00000255500 204 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 Y_RNA.11-201ENST00000362375 109 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 REG3A-203ENST00000409839 788 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC069157.1-201ENST00000421749 137 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 RPS3AP38-201ENST00000435889 763 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC245884.3-201ENST00000445491 218 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 RN7SL567P-201ENST00000462015 303 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 UOX-201ENST00000471089 899 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 RN7SL144P-201ENST00000475761 295 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 HMGB1P36-201ENST00000487709 576 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AP001025.2-201ENST00000490908 477 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC117482.1-201ENST00000490933 911 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC012170.1-201ENST00000495139 359 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 RN7SL167P-201ENST00000498381 302 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC006390.1-201ENST00000508068 283 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AP003385.4-201ENST00000524977 324 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 LINC01588-211ENST00000556434 892 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC018552.1-201ENST00000562099 811 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 LINC01912-201ENST00000581844 496 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 NF1P5-201ENST00000588287 448 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC005339.1-201ENST00000598070 392 ntTSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC123786.2-201ENST00000603459 275 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AP006545.2-201ENST00000607091 461 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 GPX2-205ENST00000612794 1084 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC247036.7-201ENST00000639643 304 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ABBA01040607.1-201ENST00000640749 321 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AL080317.3-201ENST00000607434 4315 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 DCTN2-202ENST00000543672 1321 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC011416.1-201ENST00000514947 1732 ntBASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC9.98□□□□□ -0.81
RTN4Q9NQC3 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 SPATA31C2-201ENST00000324915 3777 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 TMSB4XP4-201ENST00000323496 618 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RN7SKP10-201ENST00000364291 325 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 VAMP8-202ENST00000409760 805 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RPS19P1-201ENST00000415286 434 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 GZMB-204ENST00000415355 923 ntTSL 2 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 ELOCP14-201ENST00000428070 331 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 EMC3-202ENST00000429759 751 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 ELOCP7-201ENST00000439968 331 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RPS4XP4-201ENST00000443195 763 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RPL17P49-201ENST00000443728 411 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AL583808.1-201ENST00000445976 499 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 LINC01054-201ENST00000446989 514 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AC090142.1-201ENST00000465776 462 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 DLEU1-220ENST00000478860 602 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AC007182.2-201ENST00000489251 402 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RPL35P6-201ENST00000490024 372 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AC005726.1-201ENST00000494679 427 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 RN7SL252P-201ENST00000496274 297 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 GAPDHP60-201ENST00000513846 995 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 IGLV3-7-201ENST00000522952 271 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 CD59-208ENST00000527577 686 ntAPPRIS P2 TSL 3 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AP003034.1-201ENST00000534621 422 ntBASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC9.97□□□□□ -0.81
RTN4Q9NQC3 KRT18P47-201ENST00000561341 977 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms