Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 SUMO2P7-201ENST00000511179 285 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC087752.2-201ENST00000521219 281 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC104417.1-201ENST00000523974 751 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC131935.1-201ENST00000524621 333 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 NDUFS5P6-201ENST00000529136 295 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 TDGP1-201ENST00000543961 1229 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AL591767.3-201ENST00000554632 525 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 SNORA70D-201ENST00000578836 135 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 IGLJCOR18-201ENST00000584002 424 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC013444.2-201ENST00000603317 787 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC020765.1-201ENST00000604296 328 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC018618.2-201ENST00000604770 446 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC093783.1-201ENST00000612976 329 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC135068.11-201ENST00000636378 921 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC007406.5-201ENST00000570140 3170 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 MTCO1P18-201ENST00000455518 1419 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 AC007993.1-201ENST00000621298 2430 ntBASIC6.74□□□□□ -1.33
TRIM39Q9HCM9 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ZNF806-201ENST00000438300 1774 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RNU4-31P-201ENST00000384211 141 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RNA5SP474-201ENST00000391234 90 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 KRR1P1-201ENST00000419430 803 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC073052.1-201ENST00000440417 714 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 E2F6P3-201ENST00000441743 743 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RPL23AP28-201ENST00000448062 470 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 MGAT2P1-201ENST00000449718 797 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 Z99714.1-201ENST00000450463 807 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RN7SKP198-201ENST00000459286 306 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC026254.2-201ENST00000475295 371 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC023818.1-201ENST00000498379 384 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC095057.1-201ENST00000507583 168 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 MINOS1P4-201ENST00000515470 318 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC010442.1-201ENST00000515583 816 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 HMGB1P1-201ENST00000522557 636 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC087897.1-201ENST00000550134 156 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RN7SL622P-201ENST00000585292 275 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 RPS4XP21-201ENST00000603814 750 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 AC025287.2-201ENST00000621911 668 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 SNORA16A-202ENST00000628458 135 ntBASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TRIM39Q9HCM9 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 485.1 ms