Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC112503.1-201ENST00000608436 391 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AC124016.2-201ENST00000610058 665 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AL137000.1-201ENST00000610528 1244 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 CLUHP10-201ENST00000631979 980 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 HSPD1P14-201ENST00000432666 1618 ntBASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
AMBRA1Q9C0C7 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC105235.1-201ENST00000623208 1816 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MIR16-2-201ENST00000362117 81 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 SNORA38B-201ENST00000363524 131 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 RNU1-59P-201ENST00000364829 162 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 RNA5SP152-201ENST00000365184 110 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MIR1266-201ENST00000408125 84 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 SEPT7P8-201ENST00000413308 775 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 RPS26P38-201ENST00000414476 348 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 TCEA1P2-201ENST00000420496 906 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL606495.1-201ENST00000422100 813 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC245884.2-201ENST00000426257 404 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 RPL12P49-201ENST00000441100 121 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 PPM1AP1-201ENST00000502740 1135 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 NACAP5-201ENST00000509863 636 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC010442.1-201ENST00000515583 816 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AP005902.2-201ENST00000518393 307 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC010376.1-201ENST00000522101 334 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 NPM1P35-201ENST00000533043 868 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL162632.2-201ENST00000553933 399 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 ANP32BP1-202ENST00000568553 737 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MIR4312-201ENST00000579909 76 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL049840.6-201ENST00000604583 345 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC026741.1-201ENST00000605892 482 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC015819.1-201ENST00000613588 663 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 U1.25-201ENST00000614085 162 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 U1.34-201ENST00000618578 162 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MRPL57P3-201ENST00000619218 176 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 U1.31-201ENST00000620022 160 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MRPL57P1-201ENST00000621486 265 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC061999.1-201ENST00000624454 177 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 MTND2P41-201ENST00000637599 773 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 CCDC150P1-201ENST00000537123 2215 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 AC095038.1-201ENST00000429248 1591 ntBASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
AMBRA1Q9C0C7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
AMBRA1Q9C0C7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms