Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 AC011815.2-201ENST00000618230 2021 ntBASIC8.61□□□□□ -1.03
TRIM47Q96LD4 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM47Q96LD4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 MAPK10-279ENST00000641157 2449 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RNU6-1227P-201ENST00000383981 107 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 Y_RNA.472-201ENST00000384322 102 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 Y_RNA.554-201ENST00000384672 102 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RSL24D1P4-201ENST00000400938 484 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL390840.1-201ENST00000420303 988 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 OR4F13P-201ENST00000428478 931 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL137845.2-201ENST00000444292 988 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RN7SL392P-201ENST00000473024 299 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RPS16P9-201ENST00000477220 427 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC084024.2-201ENST00000503480 791 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC011611.5-201ENST00000552477 578 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 SNX29P2-204ENST00000603801 875 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC024060.1-201ENST00000607052 494 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 AC012629.3-201ENST00000623397 328 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 TSHZ2-205ENST00000626626 670 ntBASIC8.6□□□□□ -1.03
TRIM47Q96LD4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
TRIM47Q96LD4 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC009220.2-201ENST00000489759 1751 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC096745.2-201ENST00000627783 1914 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 RNU6-670P-201ENST00000364312 104 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 RNU12-2P-201ENST00000364789 156 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 RN7SKP58-201ENST00000411010 305 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 TCEA1P4-201ENST00000415066 844 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL139413.1-201ENST00000421309 217 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC073900.1-201ENST00000429766 776 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL845321.1-201ENST00000444603 348 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 RN7SL168P-201ENST00000463821 279 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC004815.1-201ENST00000484185 331 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AL024509.2-201ENST00000493462 493 ntBASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.59□□□□□ -1.03
TRIM47Q96LD4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms