Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 CXADRP1-201ENST00000398098 1095 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 RN7SKP121-201ENST00000410842 305 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AL445213.1-201ENST00000412589 747 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC009506.2-201ENST00000420635 840 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AP003385.1-201ENST00000426387 893 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 MAPRE1P3-201ENST00000435438 796 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 RPS3AP38-201ENST00000435889 763 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 GAPDHP37-201ENST00000442317 968 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC093719.1-201ENST00000480427 441 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 RPL5P33-201ENST00000487833 905 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC073648.3-201ENST00000504939 925 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AK4P6-201ENST00000505168 528 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 LINC00556-201ENST00000569603 412 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AL356608.1-201ENST00000610034 820 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 AL589743.6-201ENST00000611025 117 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 CXADRP3-202ENST00000617265 1100 ntBASIC5.86□□□□□ -1.47
VPS33AQ96AX1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS33AQ96AX1 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC092451.3-201ENST00000625067 1343 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 RNU1-49P-201ENST00000363468 159 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SNORA77.2-201ENST00000408571 112 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC013470.3-201ENST00000420252 1194 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 YY1P1-201ENST00000427625 668 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DSTNP5-201ENST00000427921 523 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 GTF3AP6-201ENST00000432585 986 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 BMS1P11-201ENST00000442351 885 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 BMS1P9-201ENST00000457640 885 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 RN7SL352P-201ENST00000466002 277 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 RN7SL326P-201ENST00000477493 296 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SNX18P24-201ENST00000505249 671 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC097486.1-201ENST00000515331 210 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 MINOS1P4-201ENST00000515470 318 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SNORA48.9-201ENST00000516419 162 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AP001858.2-201ENST00000536213 601 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC008055.1-201ENST00000547032 609 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms