Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 MIR16-1-201ENST00000385271 89 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AL161909.1-201ENST00000397390 712 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 Z82198.3-201ENST00000421145 199 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC8.23□□□□□ -1.09
HLA-CQ95604 VDAC1P6-201ENST00000430062 855 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 RPS3AP14-201ENST00000483907 780 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 RNA5SP459-201ENST00000516628 100 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 SCARNA11.1-201ENST00000516918 132 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 IGJP1-201ENST00000522682 475 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 OR4A11P-201ENST00000529557 906 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC007424.1-203ENST00000554613 687 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC090515.3-201ENST00000560431 315 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC010487.1-201ENST00000594408 1172 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 AC069304.2-201ENST00000605154 435 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
HLA-CQ95604 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 ATP5A1P3-201ENST00000573189 1507 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 AC127070.5-201ENST00000623177 2104 ntBASIC8.23□□□□□ -1.09
HLA-CQ95604 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.23□□□□□ -1.09
HLA-CQ95604 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
HLA-CQ95604 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AL391988.1-201ENST00000614747 1553 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 SNX19P1-201ENST00000444901 2981 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 RPE-201ENST00000354506 3165 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 SMC1B-202ENST00000404354 3636 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 PDE1A-203ENST00000409365 2034 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 GNAI1-205ENST00000457358 1633 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HLA-CQ95604 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 SMG1P1-202ENST00000309865 4223 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
HLA-CQ95604 RPL24P4-201ENST00000326586 421 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 RNA5SP396-201ENST00000364834 120 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 U3.14-201ENST00000365363 227 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 EI24P3-201ENST00000399046 1062 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 MTCO3P12-201ENST00000416718 547 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-CQ95604 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 RN7SL36P-201ENST00000469345 276 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC074386.1-201ENST00000476560 767 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
HLA-CQ95604 RPL10P7-201ENST00000495649 625 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC108078.3-201ENST00000502633 489 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-CQ95604 RGS5-218ENST00000526176 574 ntTSL 4 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AP003034.1-201ENST00000534621 422 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC025260.1-201ENST00000548858 430 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.22□□□□□ -1.09
HLA-CQ95604 AC091932.1-201ENST00000569381 427 ntBASIC8.22□□□□□ -1.09
HLA-CQ95604 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms