Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4AQ8WYN0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 DDX6P1-205ENST00000441966 1436 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 RNA5SP77-201ENST00000365394 120 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 RNU6-609P-201ENST00000365459 107 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AL356057.1-202ENST00000402263 756 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 VIM2P-201ENST00000402383 1294 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 MTND4LP21-201ENST00000415303 295 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 GPN3P1-201ENST00000423883 535 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 PSMD8P1-201ENST00000436275 769 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 OR2L9P-201ENST00000444456 913 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AL512593.1-201ENST00000444758 779 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 SUMO2P1-206ENST00000445436 284 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AL606517.1-201ENST00000446914 387 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC244502.2-201ENST00000543361 851 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 CKS1BP1-201ENST00000555221 240 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 MIR5010-201ENST00000582846 120 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AL591222.2-201ENST00000604443 754 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC008555.7-201ENST00000605008 583 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 OR4G3P-201ENST00000633500 913 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 TTC41P-205ENST00000551270 3963 ntBASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
ATG4AQ8WYN0 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.34□□□□□ -1.4
ATG4AQ8WYN0 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4AQ8WYN0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4AQ8WYN0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
ATG4AQ8WYN0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.34□□□□□ -1.4
ATG4AQ8WYN0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 EIF3EP1-201ENST00000433978 1316 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 SNORD94-201ENST00000386037 137 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 SNORA77.2-201ENST00000408571 112 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RPL12P43-201ENST00000420608 499 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL121882.1-201ENST00000422893 417 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 USP24P1-201ENST00000433802 779 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RPS3AP38-201ENST00000435889 763 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 PPIAP32-201ENST00000449940 472 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RAB28P2-201ENST00000454299 641 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC078857.1-201ENST00000469870 667 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AP003385.3-201ENST00000472498 287 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 RNU6-943P-201ENST00000516960 98 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 VTA1P2-201ENST00000520205 911 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 OR8X1P-201ENST00000534542 869 ntBASIC6.33□□□□□ -1.4
ATG4AQ8WYN0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms