Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 AL136531.3-201ENST00000624378 3658 ntBASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
ALMS1Q8TCU4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 RNA5SP350-201ENST00000363298 111 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 RN7SKP28-201ENST00000364770 305 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC104837.2-201ENST00000427236 424 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 HMGB3P24-201ENST00000433260 622 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 OR4A42P-201ENST00000531397 938 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC015818.6-201ENST00000584274 634 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 FABP5P2-201ENST00000439042 408 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 CT45A11P-201ENST00000448043 1134 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 MIR3934-201ENST00000579806 107 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AC011840.5-201ENST00000582125 771 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 AL353662.3-201ENST00000625131 237 ntBASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ALMS1Q8TCU4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 RN7SKP113-201ENST00000363891 295 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 OR4K12P-201ENST00000406538 961 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 Z84478.1-201ENST00000438230 1219 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC093267.1-201ENST00000489176 961 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 OR4A40P-201ENST00000533878 948 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC096921.2-201ENST00000561507 1916 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 SNX18P3-202ENST00000565670 1750 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 RPS6P23-201ENST00000413224 722 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 NPM1P36-201ENST00000415681 835 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC009963.2-201ENST00000453431 138 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC087672.1-201ENST00000479876 766 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC079075.1-201ENST00000559543 878 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 AC104964.2-201ENST00000562242 4641 ntBASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC3.89□□□□□ -1.79
ALMS1Q8TCU4 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms