Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 U3.10-201ENST00000364459 214 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RN7SKP144-201ENST00000411108 279 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AL158827.1-201ENST00000416300 391 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RPS7P14-201ENST00000426405 583 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC013410.1-201ENST00000436223 1232 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC013403.1-201ENST00000436954 263 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RN7SL39P-201ENST00000462264 297 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC022730.1-201ENST00000473114 568 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 DEFB109A-201ENST00000482450 265 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC124945.1-201ENST00000485133 188 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RPL23AP40-201ENST00000487630 390 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AP000859.1-201ENST00000525536 307 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 OR8Q1P-201ENST00000526467 655 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 TDGP1-201ENST00000543961 1229 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AC006272.2-201ENST00000594725 163 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AL022394.1-201ENST00000606979 292 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 U91328.4-201ENST00000608919 517 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 TCP11X1-202ENST00000622971 1372 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 SAMMSON-213ENST00000641336 1521 ntBASIC5.79□□□□□ -1.48
TRIML2Q8N7C3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 CASC19-246ENST00000641625 1606 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 PARP4P2-201ENST00000446672 3326 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RNA5SP346-201ENST00000363541 121 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RNA5SP85-201ENST00000365378 119 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL050305.1-201ENST00000399993 1230 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RPS7P8-201ENST00000418311 581 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 OSTCP4-201ENST00000424397 449 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RPS27AP6-201ENST00000427962 448 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 GAPDHP19-201ENST00000431768 1005 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 OR3D1P-201ENST00000438288 955 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 COX4I1P2-201ENST00000447446 547 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 OR52I1-201ENST00000450052 1050 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL162739.1-201ENST00000450606 307 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC063955.1-201ENST00000462872 685 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RN7SL393P-201ENST00000463588 296 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 OR11I1P-201ENST00000486033 954 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC015524.1-201ENST00000491585 472 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC090958.1-201ENST00000511122 351 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC141002.1-201ENST00000607025 279 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 AC079776.5-201ENST00000641920 211 ntBASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIML2Q8N7C3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms