Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 DUTP1-201ENST00000493631 470 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC106872.4-201ENST00000510050 523 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC253576.1-201ENST00000511645 1156 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC112191.2-201ENST00000522428 333 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC011445.2-201ENST00000599274 173 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 MIR6886-201ENST00000619864 61 ntBASIC9.02□□□□□ -0.97
VPS8Q8N3P4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
VPS8Q8N3P4 AC117409.1-201ENST00000470499 1310 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 ZNF812P-201ENST00000457674 1694 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AL451142.1-201ENST00000375867 775 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 RN7SKP206-201ENST00000410823 293 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 Z84478.1-201ENST00000438230 1219 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 EIF4A1P6-201ENST00000448133 1210 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 PPIAP20-201ENST00000449839 135 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 RPSAP39-201ENST00000467439 883 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 SNORA43.3-201ENST00000517240 103 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 TMEM97P2-201ENST00000517841 403 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 NRBF2P4-201ENST00000520874 850 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AP001804.1-201ENST00000526868 919 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 IGBP1P1-201ENST00000554337 1009 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 MIR1273E-201ENST00000581165 102 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AC004477.3-201ENST00000614061 590 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AP002991.2-201ENST00000623807 2801 ntBASIC9.01□□□□□ -0.97
VPS8Q8N3P4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VPS8Q8N3P4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
VPS8Q8N3P4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 AC242426.1-201ENST00000435270 960 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 RPL12P39-201ENST00000455456 496 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 RPS26P39-201ENST00000469206 341 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AC079080.1-201ENST00000479841 822 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AC074087.1-201ENST00000512059 724 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC9□□□□□ -0.97
VPS8Q8N3P4 AC021678.3-201ENST00000517893 476 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC9□□□□□ -0.97
VPS8Q8N3P4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC9□□□□□ -0.97
VPS8Q8N3P4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS8Q8N3P4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS8Q8N3P4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC9□□□□□ -0.97
VPS8Q8N3P4 MIR4302-201ENST00000638058 60 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AP002833.3-201ENST00000625075 2265 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
VPS8Q8N3P4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9□□□□□ -0.97
VPS8Q8N3P4 YES1P1-201ENST00000418510 1628 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 AC027279.4-201ENST00000624371 2072 ntBASIC9□□□□□ -0.97
VPS8Q8N3P4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC9□□□□□ -0.97
VPS8Q8N3P4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
VPS8Q8N3P4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9□□□□□ -0.97
VPS8Q8N3P4 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 TEK-204ENST00000519097 3836 ntTSL 2 BASIC9□□□□□ -0.97
VPS8Q8N3P4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 LRRC37A14P-201ENST00000452297 462 ntBASIC8.99□□□□□ -0.97
VPS8Q8N3P4 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 RN7SKP248-201ENST00000516278 305 ntBASIC8.99□□□□□ -0.97
VPS8Q8N3P4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.99□□□□□ -0.97
VPS8Q8N3P4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
VPS8Q8N3P4 VDAC2P4-201ENST00000452925 711 ntBASIC8.98□□□□□ -0.97
VPS8Q8N3P4 RNU1-88P-201ENST00000459274 128 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms